RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 EGFP01133 1207 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 S100BP04271 92 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ASGR2P07307 311 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 SBK3P0C264 359 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 OR56A5P0C7T3 313 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 GFAPP14136 432 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NTSR1P30989 418 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PGM1P36871 562 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NSG1P42857 185 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 RGS4P49798 205 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CLNS1AP54105 237 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NAGLUP54802 743 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ADARP55265 1226 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ACTR3P61158 418 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ATP6V0D1P61421 351 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 MRPS35P82673 323 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 SLC34A1Q06495 639 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 GRSF1Q12849 480 aaKnown RBP eCLIP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 BLMHQ13867 455 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 TAF11Q15544 211 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 OR4D1Q15615 310 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 GPRC6AQ5T6X5 926 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 TXNDC11Q6PKC3 985 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NAPRTQ6XQN6 538 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ISCA2Q86U28 154 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 SLC22A9Q8IVM8 553 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NRSN1Q8IZ57 195 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PLCD3Q8N3E9 789 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 TRAM1L1Q8N609 369 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ZBTB2Q8N680 514 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 TXNDC5Q8NBS9 432 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 AGR3Q8TD06 166 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 LKAAEAR1Q8TD35 194 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CD200R1Q8TD46 325 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 EEF1AKMT1Q8WVE0 214 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 KCNJ9Q92806 393 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 STMN2Q93045 179 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PTERQ96BW5 349 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CMTM5Q96DZ9 223 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NUS1Q96E22 293 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CCDC126Q96EE4 140 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PHF21BQ96EK2 531 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 MOCOSQ96EN8 888 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CNDP1Q96KN2 507 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 SORT1Q99523 831 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CCDC28BQ9BUN5 200 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 SHCBP1LQ9BZQ2 653 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 C20orf27Q9GZN8 174 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 DERL2Q9GZP9 239 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 C8orf33Q9H7E9 229 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 KCNK12Q9HB15 430 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PNPOQ9NVS9 261 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NCKIPSDQ9NZQ3 722 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 VTI1BQ9UEU0 232 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 LRCH1Q9Y2L9 728 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 DHRS7Q9Y394 339 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 LAMA3Q16787 3333 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 GOLGA8QA0A0J9YX86 632 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 GOLGA8OA6NCC3 632 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SYCE1LA8MT33 242 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 A8MT66 165 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 B2RBV5 119 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TARM1B6A8C7 271 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 GOLGA8NF8WBI6 632 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 H0Y858 1186 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 PSMD11O00231 422 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CDC7O00311 574 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF195O14628 629 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 INPP4BO15327 924 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CCNT2O60583 730 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SNX2O60749 519 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 MTX2O75431 263 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 IPO13O94829 963 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ADH1BP00325 375 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 C6P13671 934 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 HOXB2P14652 356 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 DRD1P21728 446 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CD9P21926 228 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CPOXP36551 454 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 P2RY2P41231 377 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 GPR1P46091 355 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 PTDSS1P48651 473 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CLCN2P51788 898 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CLCN7P51798 805 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 DCDC1P59894 354 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SATB1Q01826 763 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RCN2Q14257 317 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 HERC3Q15034 1050 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TSNQ15631 228 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CST6Q15828 149 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 GSTA3Q16772 222 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TTLL9Q3SXZ7 439 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TMEM52BQ4KMG9 183 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ACSBG2Q5FVE4 666 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF648Q5T619 568 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF776Q68DI1 518 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms