RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 AFTPHQ6ULP2 937 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 ZC3H7AQ8IWR0 971 aaKnown RBP14.42□□□□□ -0.1
SCARB2-221ENST00000640341 SCML4Q8N228 414 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 MFSD2AQ8NA29 543 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 CCDC138Q96M89 665 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 RAI2Q9Y5P3 530 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 BOLA2-SMG1P6H3BVE0 249 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 DFNA5O60443 496 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 ALPIP09923 528 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 FCGR1AP12314 374 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 TYMPP19971 482 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 POLR2IP36954 125 aaKnown RBP14.42□□□□□ -0.1
SCARB2-221ENST00000640341 ERVK-8P63133 956 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 LAPTM4AQ15012 233 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 CLLU1OSQ5K130 101 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 SPESP1Q6UW49 350 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 RNF19BQ6ZMZ0 732 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 Q6ZSR9 355 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 PATL1Q86TB9 770 aaKnown RBP14.42□□□□□ -0.1
SCARB2-221ENST00000640341 TBC1D21Q8IYX1 336 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 SFRP1Q8N474 314 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 NSUN3Q9H649 340 aaKnown RBP14.42□□□□□ -0.1
SCARB2-221ENST00000640341 PFDN4Q9NQP4 134 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 HACD3Q9P035 362 aa14.42□□□□□ -0.1
SCARB2-221ENST00000640341 AGO1Q9UL18 857 aaKnown RBP14.42□□□□□ -0.1
SCARB2-221ENST00000640341 UNCXA6NJT0 531 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 FAM155AB1AL88 458 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 INSIG1O15503 277 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 GJB5O95377 273 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ZBTB11O95625 1053 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 MLYCDO95822 493 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 GSNP06396 782 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 RHOCP08134 193 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 OGNP20774 298 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 HOXC8P31273 242 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 SGSHP51688 502 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 CHRNB3Q05901 458 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 TNK2Q07912 1038 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 FOXD4Q12950 439 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 PTRHD1Q6GMV3 140 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 FAM151BQ6UXP7 276 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 OR4F6Q8NGB9 312 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 SKA2Q8WVK7 121 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 SDCCAG3Q96C92 435 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 DUS3LQ96G46 650 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 AURKBQ96GD4 344 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ITCHQ96J02 903 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 BIRC8Q96P09 236 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 FARSBQ9NSD9 589 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 GABRQQ9UN88 632 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 NUP214P35658 2090 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 RPS17P08708 135 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 LPOP22079 712 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 MGAT3Q09327 533 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ABRAXAS2Q15018 415 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ENPP6Q6UWR7 440 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 SPATA19Q7Z5L4 167 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 PHACTR4Q8IZ21 702 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 NKAPQ8N5F7 415 aaKnown RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 TRIB2Q92519 343 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 LRRC3Q9BY71 257 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 GPR63Q9BZJ6 419 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 PRAMEF12O95522 483 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 MATN1P21941 496 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 SHMT2P34897 504 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ATXN7L2Q5T6C5 722 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 CYP20A1Q6UW02 462 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 PRSS55Q6UWB4 352 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 GCNT7Q6ZNI0 430 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 ANKRD46Q86W74 232 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 OSCP1Q8WVF1 389 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 HIPK3Q9H422 1215 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 IPPKQ9H8X2 491 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 NLE1Q9NVX2 485 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-221ENST00000640341 KLQ9UEF7 1012 aa14.41□□□□□ -0.1
SCARB2-221ENST00000640341 UGT1A1P22309 533 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 UGT1A4P22310 534 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 HOXD9P28356 352 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 CTGFP29279 349 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 UGT1A3P35503 534 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 UGT1A5P35504 534 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 FAM174BQ3ZCQ3 159 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 GTDC1Q4AE62 458 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 RSPO2Q6UXX9 243 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 RTN4RL1Q86UN2 441 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 HID1Q8IV36 788 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 PACRGLQ8N7B6 248 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 GFM2Q969S9 779 aaKnown RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 PLGRKTQ9HBL7 147 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 LATS2Q9NRM7 1088 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 VAPAQ9P0L0 249 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 AASSQ9UDR5 926 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 SLC30A1Q9Y6M5 507 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 E2F3O00716 465 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 EEDO75530 441 aaKnown RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 CST1P01037 141 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms