RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR4L1Q8NH43 312 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 C16orf45Q96MC5 204 aaPredicted RBP21.39■■□□□ 1.01
SCN1B-206ENST00000638536 TRIM51Q9BSJ1 452 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 RDH14Q9HBH5 336 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 ASIC3Q9UHC3 531 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 PSMD13Q9UNM6 376 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 ENTPD2Q9Y5L3 495 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 TTI1O43156 1089 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 PRLHRP49683 370 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 UBE2IP63279 158 aaKnown RBP21.38■■□□□ 1.01
SCN1B-206ENST00000638536 HHEXQ03014 270 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 CFHR1Q03591 330 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 LAMB3Q13751 1172 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 SPIDRQ14159 915 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 AFTPHQ6ULP2 937 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 RBM44Q6ZP01 1051 aaKnown RBP21.38■■□□□ 1.01
SCN1B-206ENST00000638536 USP53Q70EK8 1073 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 JAMLQ86YT9 394 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 PEX13Q92968 403 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 GFM1Q96RP9 751 aaKnown RBP21.38■■□□□ 1.01
SCN1B-206ENST00000638536 FOXP3Q9BZS1 431 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 CPNE7Q9UBL6 633 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 SOX13Q9UN79 622 aa21.38■■□□□ 1.01
SCN1B-206ENST00000638536 DNMT3AQ9Y6K1 912 aaPredicted RBP21.38■■□□□ 1.01
SCN1B-206ENST00000638536 PMS2P1A4D2B8 440 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 MGAT4DA6NG13 374 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 DNALI1O14645 258 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 IDSP22304 550 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 MAGEA3P43357 314 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 PRAMEP78395 509 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 BIRC2Q13490 618 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 PPIL6Q8IXY8 311 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 MDM1Q8TC05 714 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 ATXN7L3BQ96GX2 97 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 ZNF514Q96K75 400 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 LINC00615Q96LM1 132 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 FCRL3Q96P31 734 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 DEPDC7Q96QD5 511 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 KRT12Q99456 494 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 SARS2Q9NP81 518 aaKnown RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 IL1RAPL1Q9NZN1 696 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 RNF14Q9UBS8 474 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 D6RAR5 112 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 GOLGA8KD6RF30 607 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 GOLGA8TH3BQL2 631 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 AP3B1O00203 1094 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 TCEA3O75764 348 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 RALBP11234 206 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 CD1CP29017 333 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 SARNPP82979 210 aaKnown RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 DR1Q01658 176 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 ZNF658BQ4V348 819 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 METRNLQ641Q3 311 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 ZNF574Q6ZN55 896 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 SPDYE1Q8NFV5 336 aaPredicted RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 OR2L2Q8NH16 312 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 NUDT22Q9BRQ3 303 aa21.37■■□□□ 1.01
SCN1B-206ENST00000638536 MRM3Q9HC36 420 aaKnown RBP21.37■■□□□ 1.01
SCN1B-206ENST00000638536 URB1O60287 2271 aaKnown RBP21.36■■□□□ 1.01
SCN1B-206ENST00000638536 IGHV1OR21-1A0A087WYE8 117 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 KIR2DS5A0A0G2JLQ3 304 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 A0A0G2JNG1 304 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 CFAP99D6REC4 459 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 CCDC188H7C350 402 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 KIR2DS3K7RE56 304 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 AGRPO00253 132 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 BANF1O75531 89 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 MLNP12872 115 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 HOXB3P14651 431 aaPredicted RBP21.36■■□□□ 1.01
SCN1B-206ENST00000638536 VCLP18206 1134 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 XRCC1P18887 633 aaPredicted RBP21.36■■□□□ 1.01
SCN1B-206ENST00000638536 KIR2DS5Q14953 304 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 AGAP9Q5VTM2 703 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 WASH2PQ6VEQ5 465 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 HEXDCQ8WVB3 486 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 SGSM3Q96HU1 749 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 SIGLEC10Q96LC7 697 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 PWWP2AQ96N64 755 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 TBC1D10AQ9BXI6 508 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 WASH6PQ9NQA3 447 aa21.36■■□□□ 1.01
SCN1B-206ENST00000638536 CFAP20Q9Y6A4 193 aaKnown RBP21.36■■□□□ 1.01
SCN1B-206ENST00000638536 OR5K4A6NMS3 321 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 KCNJ13O60928 360 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 VAPBO95292 243 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 POLBP06746 335 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 GPR3P46089 330 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 CYP4F3Q08477 520 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 C2orf54Q08AI8 447 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 FASTKD1Q53R41 847 aaKnown RBP21.35■■□□□ 1.01
SCN1B-206ENST00000638536 IZUMO3Q5VZ72 239 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 CASC4Q6P4E1 433 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 NAPRTQ6XQN6 538 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 SLC9B2Q86UD5 537 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 CFAP206Q8IYR0 622 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 SPATA4Q8NEY3 305 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 SLC38A3Q99624 504 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 SEMA6CQ9H3T2 930 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 XAB2Q9HCS7 855 aaKnown RBP21.35■■□□□ 1.01
SCN1B-206ENST00000638536 CATSPERZQ9NTU4 200 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 KCNK4Q9NYG8 393 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms