RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 KIAA1191Q96A73 305 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 CCDC126Q96EE4 140 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 LINGO1Q96FE5 620 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
CLN6-223ENST00000637823 CCM2Q9BSQ5 444 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 MECRQ9BV79 373 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 TEX101Q9BY14 249 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 MBNL1Q9NR56 388 aaKnown RBP11.6□□□□□ -0.55
CLN6-223ENST00000637823 CPSF2Q9P2I0 782 aaKnown RBP11.6□□□□□ -0.55
CLN6-223ENST00000637823 MUTYHQ9UIF7 546 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 SIT1Q9Y3P8 196 aa11.6□□□□□ -0.55
CLN6-223ENST00000637823 TK2O00142 265 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 TRIM13O60858 407 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 ZNF217O75362 1048 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 MTX2O75431 263 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 SEMA4FO95754 770 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 TSPAN12O95859 305 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 PCCBP05166 539 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 GSTM1P09488 218 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 BGNP21810 368 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 ATP5F1P24539 256 aaPredicted RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 GRK2P25098 689 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 CCR7P32248 378 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 PRLHRP49683 370 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 CCR5P51681 352 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 GSTM4Q03013 218 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 INPP5AQ14642 412 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 BCL7AQ4VC05 210 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 ANO7Q6IWH7 933 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 HEATR4Q86WZ0 1026 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 CPNE9Q8IYJ1 553 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 LRRC34Q8IZ02 419 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 PPP1R14CQ8TAE6 165 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 NAT14Q8WUY8 206 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 IER2Q9BTL4 223 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 FAM126AQ9BYI3 521 aaPredicted RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 UNKQ9C0B0 810 aaKnown RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 OR2AG1Q9H205 316 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 ALG9Q9H6U8 611 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 PHPT1Q9NRX4 125 aaPredicted RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 OXSMQ9NWU1 459 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 C2orf42Q9NWW7 574 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 ATXN10Q9UBB4 475 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 XPR1Q9UBH6 696 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 MBD1Q9UIS9 605 aaPredicted RBP11.59□□□□□ -0.55
CLN6-223ENST00000637823 TMCO1Q9UM00 188 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 GPR34Q9UPC5 381 aa11.59□□□□□ -0.55
CLN6-223ENST00000637823 OR2AG2A6NM03 316 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 C10orf142B7Z368 130 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 GPR89AB7ZAQ6 455 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 RAD51BO15315 384 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 DLX3O60479 287 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 KERAO60938 352 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 SMIM24O75264 130 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 APBB3O95704 486 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 HOXC4P09017 264 aaPredicted RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 GPR89BP0CG08 455 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 TPBGLP0DKB5 382 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 MPC1LP0DKB6 136 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 FGF3P11487 239 aaPredicted RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 ENO3P13929 434 aaPredicted RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 DRD4P21917 467 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 MAT2AP31153 395 aaKnown RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 MAGEA9P43362 315 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 KCNC1P48547 511 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CTSCP53634 463 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 DNAJB13P59910 316 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 PPP2CBP62714 309 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 PPP2CAP67775 309 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CDK3Q00526 305 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 STX3Q13277 289 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 GBX1Q14549 363 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 OR4D1Q15615 310 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CYHR1Q6ZMK1 362 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 NEK10Q6ZWH5 1172 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 TRIM74Q86UV6 250 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 MYO1HQ8N1T3 1032 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CAMKK1Q8N5S9 505 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 DENND6BQ8NEG7 585 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 ASZ1Q8WWH4 475 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 ELMO1Q92556 727 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 PTERQ96BW5 349 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 HHIPQ96QV1 700 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CCT8L2Q96SF2 557 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 APOOQ9BUR5 198 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 PITPNM3Q9BZ71 974 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 WDR26Q9H7D7 661 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 CD93Q9NPY3 652 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 WSB2Q9NYS7 404 aaPredicted RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 DNMT3AQ9Y6K1 912 aaPredicted RBP11.58□□□□□ -0.56
CLN6-223ENST00000637823 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms