RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 MAPK9P45984 424 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 EPHA4P54764 986 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 GDF10P55107 478 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 UBE2IP63279 158 aaKnown RBP18.07■□□□□ 0.48
CLN6-214ENST00000636314 TMEM71Q6P5X7 295 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 KLHDC8BQ8IXV7 354 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 ATG4AQ8WYN0 398 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 USP7Q93009 1102 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 LRRC40Q9H9A6 602 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 TMEM9Q9P0T7 183 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 LILRA5A6NI73 299 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 SRP72O76094 671 aaKnown RBP18.06■□□□□ 0.48
CLN6-214ENST00000636314 METTL18O95568 372 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 VIPP01282 170 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 SFTPCP11686 197 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 ITGB6P18564 788 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 MSH3P20585 1137 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 RPL10P27635 214 aaKnown RBP18.06■□□□□ 0.48
CLN6-214ENST00000636314 CA5AP35218 305 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 CYP4F2P78329 520 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 TBR1Q16650 682 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 DENND5AQ6IQ26 1287 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 C11orf96Q7Z7L8 435 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 RASGEF1AQ8N9B8 481 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 OR13C4Q8NGS5 318 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 FRMD8P1Q9BZ68 369 aaPredicted RBP18.06■□□□□ 0.48
CLN6-214ENST00000636314 EPB41L1Q9H4G0 881 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 ASB8Q9H765 288 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 ARNT2Q9HBZ2 717 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 POT1Q9NUX5 634 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 FOXJ2Q9P0K8 574 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 SCHIP1Q9P0W5 487 aaPredicted RBP18.06■□□□□ 0.48
CLN6-214ENST00000636314 KCTD3Q9Y597 815 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 SDK2Q58EX2 2172 aa18.06■□□□□ 0.48
CLN6-214ENST00000636314 PTPN13Q12923 2485 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 PRR19A6NJB7 356 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 OR2AG2A6NM03 316 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 SUV39H1O43463 412 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 NRDCO43847 1150 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 KCNJ13O60928 360 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 XRCC1P18887 633 aaPredicted RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 CSTF2P33240 577 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLN6-214ENST00000636314 HADHAP40939 763 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 ZNF140P52738 457 aaPredicted RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 CTSCP53634 463 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 DRG2P55039 364 aaKnown RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 TMPRSS15P98073 1019 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 RPS6KA1Q15418 735 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 LONRF2Q1L5Z9 754 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 TMEM164Q5U3C3 297 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 AGAP9Q5VTM2 703 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 KCTD11Q693B1 232 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 WDR74Q6RFH5 385 aaPredicted RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 AMZ2Q86W34 360 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 SLC13A5Q86YT5 568 aaPredicted RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 LRRC8AQ8IWT6 810 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
CLN6-214ENST00000636314 AGBL5Q8NDL9 886 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 NCSTNQ92542 709 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 TBC1D10AQ9BXI6 508 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 UCK1Q9HA47 277 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 CRLS1Q9UJA2 301 aa18.05■□□□□ 0.48
CLN6-214ENST00000636314 TLN1Q9Y490 2541 aaKnown RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 C9orf172C9J069 976 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 PSMD3O43242 534 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 LIASO43766 372 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 POP7O75817 140 aaKnown RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 AP2A1O95782 977 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 CCL4P13236 92 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 BRAFP15056 766 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 WT1P19544 449 aaPredicted RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 ITGALP20701 1170 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 SLC19A1P41440 591 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 HALP42357 657 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 DMPKQ09013 629 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 MSLNQ13421 630 aaPredicted RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 SNAP47Q5SQN1 464 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 FNBP1LQ5T0N5 605 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 MEI1Q5TIA1 1274 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 TMEM220Q6QAJ8 160 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 ABRAXAS1Q6UWZ7 409 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 WASH2PQ6VEQ5 465 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 TMEM26Q6ZUK4 368 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 DET1Q7L5Y6 550 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 FAM129CQ86XR2 697 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 ULK4Q96C45 1275 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 CXorf40BQ96DE9 158 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 RTP4Q96DX8 246 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 ZNF514Q96K75 400 aaPredicted RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 C19orf43Q9BQ61 176 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 WASH6PQ9NQA3 447 aa18.04■□□□□ 0.48
CLN6-214ENST00000636314 ZNF624Q9P2J8 865 aaPredicted RBP18.04■□□□□ 0.48
CLN6-214ENST00000636314 OR52A4PA6NMU1 304 aa18.03■□□□□ 0.48
CLN6-214ENST00000636314 IFNB1P01574 187 aa18.03■□□□□ 0.48
CLN6-214ENST00000636314 STIP1P31948 543 aaKnown RBP18.03■□□□□ 0.48
CLN6-214ENST00000636314 XIAPP98170 497 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms