RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ARHGAP36Q6ZRI8 547 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 GALNT4Q8N4A0 578 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 TMEM151AQ8N4L1 468 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 DNAAF3Q8N9W5 541 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 DNAJC1Q96KC8 554 aaKnown RBP15.33■□□□□ 0.05
CLN8-209ENST00000635970 KLHL32Q96NJ5 620 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 SLC6A17Q9H1V8 727 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 ZDHHC2Q9UIJ5 367 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 TCRBV21S2A2A0A5A6 115 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 DYTNA2CJ06 578 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 H3BNH8 94 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 H3BSA7 217 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 DFFAO00273 331 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 NEMP1O14524 444 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
CLN8-209ENST00000635970 RNASEH2AO75792 299 aaKnown RBP15.33■□□□□ 0.04
CLN8-209ENST00000635970 BMP10O95393 424 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 CD160O95971 181 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 SRPRAP08240 638 aaKnown RBP15.33■□□□□ 0.04
CLN8-209ENST00000635970 SRCP12931 536 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 TDGF1P13385 188 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 SLC7A1P30825 629 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 EMP3P54852 163 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 PKNOX1P55347 436 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 IRF9Q00978 393 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 PARP15Q460N3 678 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 AFMIDQ63HM1 303 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 CES3Q6UWW8 571 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 MAMSTRQ6ZN01 415 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 CACUL1Q86Y37 369 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 TSTD1Q8NFU3 115 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 C20orf96Q9NUD7 363 aaPredicted RBP15.33■□□□□ 0.04
CLN8-209ENST00000635970 SEPT10Q9P0V9 454 aa15.33■□□□□ 0.04
CLN8-209ENST00000635970 COPG1Q9Y678 874 aaKnown RBP15.33■□□□□ 0.04
CLN8-209ENST00000635970 NPC1O15118 1278 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 PAPSS2O95340 614 aaPredicted RBP15.32■□□□□ 0.04
CLN8-209ENST00000635970 STAMBPO95630 424 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 DPP6P42658 865 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 NDST2P52849 883 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 NAGLUP54802 743 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
CLN8-209ENST00000635970 DNAJB13P59910 316 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 SERINC3Q13530 473 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 NXNQ6DKJ4 435 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 PIWIL4Q7Z3Z4 852 aaKnown RBP15.32■□□□□ 0.04
CLN8-209ENST00000635970 PACRGLQ8N7B6 248 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 MDGA1Q8NFP4 955 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 HMGB4Q8WW32 186 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 AGAP2Q99490 1192 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 C8orf4Q9NR00 106 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 NCKIPSDQ9NZQ3 722 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 ZNHIT2Q9UHR6 403 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 RAPGEFL1Q9UHV5 662 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 PCDHGB4Q9UN71 923 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 HS3ST2Q9Y278 367 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 PCDHGB5Q9Y5G0 923 aa15.32■□□□□ 0.04
CLN8-209ENST00000635970 TARM1B6A8C7 271 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 H0Y858 1186 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 J3KR12 359 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 PTPN3P26045 913 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ETFBP38117 255 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 DGKEP52429 567 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 PSME3P61289 254 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 TCF15Q12870 199 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SFSWAPQ12872 951 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 HNRNPA1L2Q32P51 320 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 KRT80Q6KB66 452 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 HACD2Q6Y1H2 254 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 CHSY3Q70JA7 882 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 AMIGO2Q86SJ2 522 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ADAMTS16Q8TE57 1224 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 FRS2Q8WU20 508 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 CCDC126Q96EE4 140 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 RMND5BQ96G75 393 aaPredicted RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 ANKRD60Q9BZ19 345 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 TPSD1Q9BZJ3 242 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 MKRN2Q9H000 416 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 GBA3Q9H227 469 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 CLK4Q9HAZ1 481 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 PIH1D1Q9NWS0 290 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 PACSIN3Q9UKS6 424 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 RUVBL2Q9Y230 463 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 FCF1Q9Y324 198 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 FANCMQ8IYD8 2048 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 TCRBV3S1A0A5B6 114 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 HEATR9A2RTY3 570 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 KDELR3O43731 214 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 BNIP3LO60238 219 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SYNCRIPO60506 623 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 GABRG2P18507 467 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SERPINH1P50454 418 aaKnown RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 ESRRGP62508 458 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SQLEQ14534 574 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 STARD3Q14849 445 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 DLG2Q15700 870 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 IL23RQ5VWK5 629 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 NAPEPLDQ6IQ20 393 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 Q6ZVU0 165 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ZC3HC1Q86WB0 502 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms