RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 EFHD1Q9BUP0 239 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RIOK2Q9BVS4 552 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 ERVK-6Q9BXR3 956 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 FAM126AQ9BYI3 521 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 C11orf49Q9H6J7 331 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 BRD9Q9H8M2 597 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TDP1Q9NUW8 608 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 MCM8Q9UJA3 840 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ZNF490Q9ULM2 529 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 NRG2O14511 850 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 LEFTY1O75610 366 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IGLV3-25P01717 112 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 CA3P07451 260 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 ELFN1P0C7U0 828 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IMPDH1P20839 514 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 NR4A1P22736 598 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 LAPTM5Q13571 262 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 AARS2Q5JTZ9 985 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 MANEALQ5VSG8 457 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 TRAF7Q6Q0C0 670 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 CHST15Q7LFX5 561 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 NET1Q7Z628 596 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 PHACTR4Q8IZ21 702 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 OR4F6Q8NGB9 312 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 FAM162AQ96A26 154 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 ZSWIM3Q96MP5 696 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PPP1R2P1Q96PQ5 205 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 TMEM79Q9BSE2 394 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 DPY30Q9C005 99 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 ARMC7Q9H6L4 198 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IL26Q9NPH9 171 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 TMEM98Q9Y2Y6 226 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PTPRZ1P23471 2315 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 CAPN14A8MX76 684 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 LOC730098B7Z3J9 87 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PITPNM1O00562 1244 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 DIRAS1O95057 198 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PEX11BO96011 259 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 B3GALT4O96024 378 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 G6PDP11413 515 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IGFBP4P22692 258 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SOAT1P35610 550 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 YAP1P46937 504 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 NRIP1P48552 1158 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IRF8Q02556 426 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 FAM109BQ6ICB4 259 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 SLC8B1Q6J4K2 584 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 CXorf57Q6NSI4 855 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 SYVN1Q86TM6 617 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.41□□□□□ -1.22
PKP4-217ENST00000628904 KRTCAP2Q8N6L1 136 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 GPR26Q8NDV2 337 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 OR2AP1Q8NGE2 309 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 RELTQ969Z4 430 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PHF12Q96QT6 1004 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PKP2Q99959 881 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 STX18Q9P2W9 335 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 BCAP29Q9UHQ4 241 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 AP4S1Q9Y587 144 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SNX8Q9Y5X2 465 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SLCO1B7G3V0H7 640 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PABPC1P11940 636 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 EPB42P16452 691 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 BPIP17213 487 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IL10P22301 178 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 PTGER1P34995 402 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 METAP1P53582 386 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 LCP2Q13094 533 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 RIPK1Q13546 671 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 FAM174BQ3ZCQ3 159 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 MPPE1Q53F39 396 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 IER5LQ5T953 404 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 ANO7Q6IWH7 933 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 TMEM214Q6NUQ4 689 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 KIAA0408Q6ZU52 694 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 EGFL6Q8IUX8 553 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SLC39A11Q8N1S5 342 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 NKAPQ8N5F7 415 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 JPH3Q8WXH2 748 aaPredicted RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 TUBGCP5Q96RT8 1024 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SLC25A23Q9BV35 468 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 C1QTNF1Q9BXJ1 281 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 ING2Q9H160 280 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 SPAG4Q9NPE6 437 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 INTS7Q9NVH2 962 aaKnown RBP7.41□□□□□ -1.22
PKP4-217ENST00000628904 POLG2Q9UHN1 485 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 LNPEPQ9UIQ6 1025 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 BAG5Q9UL15 447 aa7.41□□□□□ -1.22
PKP4-217ENST00000628904 CFAP99D6REC4 459 aa7.4□□□□□ -1.22
PKP4-217ENST00000628904 GRM6O15303 877 aa7.4□□□□□ -1.22
PKP4-217ENST00000628904 MAN1A2O60476 641 aa7.4□□□□□ -1.22
PKP4-217ENST00000628904 MMP20O60882 483 aa7.4□□□□□ -1.22
PKP4-217ENST00000628904 PRLP01236 227 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms