RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 CLCQ05315 142 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PCBP2Q15366 365 aaKnown RBP eCLIP7.09□□□□□ -1.272e-7■■■■■ 56.4
CTNNA1-244ENST00000627109 ATP6AP1Q15904 470 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 FAM171A1Q5VUB5 890 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 EPHX4Q8IUS5 362 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 MIER2Q8N344 545 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 NKAPQ8N5F7 415 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PCYOX1LQ8NBM8 494 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PDZD8Q8NEN9 1154 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 HM13Q8TCT9 377 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 KCNJ9Q92806 393 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TUBGCP3Q96CW5 907 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF382Q96SR6 550 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OLAHQ9NV23 265 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PTBP2Q9UKA9 531 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 DMTF1Q9Y222 760 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SCN5AQ14524 2016 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SUPT3HB4E1H0 165 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 H3BNH8 94 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 UBXN8O00124 270 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ANKRD28O15084 1053 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 INSIG1O15503 277 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 HNRNPRO43390 633 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PIP5K1CO60331 668 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SUPT3HO75486 399 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ECI2O75521 394 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 BMP10O95393 424 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 UROSP10746 265 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF23P17027 643 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 RPS3P23396 243 aaKnown RBP eCLIP7.09□□□□□ -1.279e-8■■■■□ 22.2
CTNNA1-244ENST00000627109 RGRP47804 291 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CCT8P50990 548 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 HNRNPFP52597 415 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 HK3P52790 923 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 GK3PQ14409 553 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 GRB7Q14451 532 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 KIAA0040Q15053 153 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TAF12Q16514 161 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 FUT11Q495W5 492 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 FAM219BQ5XKK7 198 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CXorf57Q6NSI4 855 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 DHRS4L2Q6PKH6 230 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SPRED2Q7Z698 418 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CARNMT1Q8N4J0 409 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 EFHBQ8N7U6 833 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OR52E4Q8NGH9 312 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OR9I1Q8NGQ6 314 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CD200R1Q8TD46 325 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF558Q96NG5 402 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 COQ10BQ9H8M1 238 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 FBRSL1Q9HCM7 1045 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ASIC5Q9NY37 505 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CCL27Q9Y4X3 112 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OR51B4Q9Y5P0 310 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 BACE2Q9Y5Z0 518 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 A0A0D9SEW6 157 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 TYW5A2RUC4 315 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SAC3D1A6NKF1 404 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SYCE1LA8MT33 242 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 VSTM5A8MXK1 200 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 H7C4K7 107 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ZNF701M0R085 212 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ARNTLO00327 626 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 PPP6CO00743 305 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ANGPT2O15123 496 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 GREM1O60565 184 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CLDN11O75508 207 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SOAT2O75908 522 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 MLYCDO95822 493 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SPATA31D3P0C874 917 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 HMGA1P17096 107 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 LBPP18428 481 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 MYF6P23409 242 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CDKN1CP49918 316 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CLCN7P51798 805 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ELAVL2Q12926 359 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 PTPRCAPQ14761 206 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CBX2Q14781 532 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 PFKFB4Q16877 469 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 NCEH1Q6PIU2 408 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SCIMPQ6UWF3 145 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 USP51Q70EK9 711 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ADGRG5Q8IZF4 528 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 ATAD1Q8NBU5 361 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 UBTD2Q8WUN7 234 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 LRTOMTQ8WZ04 291 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 BHMTQ93088 406 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 LRRC58Q96CX6 371 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 EXOC2Q96KP1 924 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 C17orf80Q9BSJ5 609 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 MID1IP1Q9NPA3 183 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 LATS2Q9NRM7 1088 aa7.08□□□□□ -1.28
CTNNA1-244ENST00000627109 CEPT1Q9Y6K0 416 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms