RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SLC5A9Q2M3M2 681 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 IRGCQ6NXR0 463 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 ZBTB2Q8N680 514 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 PCYOX1LQ8NBM8 494 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 BHLHE22Q8NFJ8 381 aaPredicted RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 C6orf203Q9P0P8 240 aaPredicted RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 TSR3Q9UJK0 312 aaKnown RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 CROTQ9UKG9 612 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 S100BP04271 92 aaPredicted RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 TYRP14679 529 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 LHCGRP22888 699 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 HOXA9P31269 272 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 SEMG2Q02383 582 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 DMC1Q14565 340 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 ZNF77Q15935 545 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 OR52B6Q8NGF0 335 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 PHOSPHO2Q8TCD6 241 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 FAM126AQ9BYI3 521 aaPredicted RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 LINC00597Q9H2U6 94 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 LATS2Q9NRM7 1088 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 TBC1D14Q9P2M4 693 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 OARD1Q9Y530 152 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 GPR45Q9Y5Y3 372 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 ST14Q9Y5Y6 855 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 NOTCH4Q99466 2003 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 PIKFYVEQ9Y2I7 2098 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 A0A1W2PQ67 120 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 TLL1O43897 1013 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 OR4F21O95013 312 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 UGT2B4P06133 528 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 NSG1P42857 185 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 NME5P56597 212 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ERVPABLB-1P60509 514 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 MRPS22P82650 360 aaKnown RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 KLC1Q07866 573 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 GRIK2Q13002 908 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 TRIM25Q14258 630 aaKnown RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 CRY1Q16526 586 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ADIPOR2Q86V24 386 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 RETREG3Q86VR2 466 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 PQLC1Q8N2U9 271 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 LEMD2Q8NC56 503 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 KLHL4Q9C0H6 718 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 NOL11Q9H8H0 719 aaKnown RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 SPATS2LQ9NUQ6 558 aaKnown RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ZDHHC3Q9NYG2 299 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 TMEM181Q9P2C4 612 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 CD300AQ9UGN4 299 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 PTBP2Q9UKA9 531 aaKnown RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 NDUFAF1Q9Y375 327 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 NR5A2O00482 541 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 TCN1P20061 433 aaPredicted RBP19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 RPS6KA2Q15349 733 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ZDHHC20Q5W0Z9 365 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 LPCAT4Q643R3 524 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 Q6ZVU0 165 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 GOLGA7Q7Z5G4 137 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 PLPP6Q8IY26 295 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 CDYL2Q8N8U2 506 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 FAM156AQ8NDB6 213 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ACOX2Q99424 681 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 BRD9Q9H8M2 597 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 AIG1Q9NVV5 245 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 ZDHHC7Q9NXF8 308 aa19.43■□□□□ 0.7
PCDHB11-202ENST00000624887 PLXNB3Q9ULL4 1909 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 PRORSD1PA6NEY8 169 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 WASH3PC4AMC7 463 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 PEX2P28328 305 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 DIO3P55073 304 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 TRIP10Q15642 601 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 C18orf21Q32NC0 220 aaPredicted RBP19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 LY6G5CQ5SRR4 150 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 LETMD1Q6P1Q0 360 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 PDSS2Q86YH6 399 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 CHST14Q8NCH0 376 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 MICAL1Q8TDZ2 1067 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 TSPEARQ8WU66 669 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 NSUN3Q9H649 340 aaKnown RBP19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 RIC8BQ9NVN3 520 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 MAP10Q9P2G4 905 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
PCDHB11-202ENST00000624887 OR7A17O14581 309 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 PEX1O43933 1283 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 CAPN3P20807 821 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 MRPS35P82673 323 aaKnown RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 TRAP1Q12931 704 aaKnown RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 GTF2H2Q13888 395 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 LRRC36Q1X8D7 754 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 TTLL9Q3SXZ7 439 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 VPS26BQ4G0F5 336 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 ATP13A5Q4VNC0 1218 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 COQ5Q5HYK3 327 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 PRSS36Q5K4E3 855 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 SAMD4BQ5PRF9 694 aaKnown RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 GTF2H2CQ6P1K8 395 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 BLOC1S3Q6QNY0 202 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 LAYNQ6UX15 382 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 KIAA0907Q7Z7F0 614 aaPredicted RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 OR2A12Q8NGT7 310 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms