RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EIF2DP41214 584 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 NR4A2P43354 598 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ALDH7A1P49419 539 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 NCS1P62166 190 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ERVK-8P63133 956 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 PPP1R8Q12972 351 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 LRIT3Q3SXY7 679 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 RAB41Q5JT25 222 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 MARCH8Q5T0T0 291 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 PAGE2Q7Z2X7 111 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ZFAND4Q86XD8 727 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 LACC1Q8IV20 430 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 LGI2Q8N0V4 545 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 SVOPLQ8N434 492 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 DPP10Q8N608 796 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 RHOXF1Q8NHV9 184 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 CAPSLQ8WWF8 208 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ZNF599Q96NL3 588 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 UGT2B28Q9BY64 529 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 DSN1Q9H410 356 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ERVK-18Q9QC07 812 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 SLCO3A1Q9UIG8 710 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 COL1A2P08123 1366 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 GNGT2O14610 69 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 KATNA1O75449 491 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 GRIK1P39086 918 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 YWHAHQ04917 246 aaPredicted RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 CDK5R2Q13319 367 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 HABP4Q5JVS0 413 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 NOTUMQ6P988 496 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 MMAAQ8IVH4 418 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 CLIP4Q8N3C7 705 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 FBXO39Q8N4B4 442 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 FRS2Q8WU20 508 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 FIG4Q92562 907 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ZNF566Q969W8 418 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ACOX2Q99424 681 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 SLIRPQ9GZT3 109 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 TFB2MQ9H5Q4 396 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 ATP13A1Q9HD20 1204 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ABCB10Q9NRK6 738 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 KCTD3Q9Y597 815 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 PRKACGP22612 351 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 IGFBP6P24592 240 aaPredicted RBP13.94□□□□□ -0.18
LDB3-209ENST00000623056 CD6P30203 668 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 RYKP34925 604 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 BMPR1AP36894 532 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 ADAM17P78536 824 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 PRKG2Q13237 762 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 LYSMD2Q8IV50 215 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 ZNF583Q96ND8 569 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
LDB3-209ENST00000623056 ASPSCR1Q9BZE9 553 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 C3orf18Q9UK00 162 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 ZNF225Q9UK10 706 aa13.94□□□□□ -0.18
LDB3-209ENST00000623056 NYNRINQ9P2P1 1898 aaKnown RBP13.94□□□□□ -0.18
LDB3-209ENST00000623056 SNPHO15079 494 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 NDUFB5O43674 189 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 KERAO60938 352 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 CNMDO75829 334 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 UPK1BO75841 260 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ANGPTL1O95841 491 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 CHEK2O96017 543 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 IL5RAQ01344 420 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 DGCR6Q14129 220 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 TMEM179BQ7Z7N9 219 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 FNDC5Q8NAU1 212 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 FBLIM1Q8WUP2 373 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 SLC47A1Q96FL8 570 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ZNF486Q96H40 463 aaPredicted RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 SLC25A51Q9H1U9 297 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 TP63Q9H3D4 680 aaPredicted RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 TRIT1Q9H3H1 467 aaKnown RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 MOV10Q9HCE1 1003 aaKnown RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 FBXO10Q9UK96 956 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 PCDHGA10Q9Y5H3 936 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 DNAJC25-GNG10A0A024R161 153 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ISPDA4D126 451 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 PRMT5O14744 637 aaPredicted RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 GABRDO14764 452 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 BCKDKO14874 412 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 RFPL2O75678 378 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 KCNK2O95069 426 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 GSNP06396 782 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 RPS17P08708 135 aaKnown RBP13.93□□□□□ -0.18
LDB3-209ENST00000623056 UROSP10746 265 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 SLC2A3P11169 496 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 PSMB9P28065 219 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 CD86P42081 329 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 SUOXP51687 545 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms