RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DNAJC15Q9Y5T4 150 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 C16orf96A6NNT2 1141 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 C1QTNF3-AMACRE9PGA6 284 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 CCNT2O60583 730 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 KATNA1O75449 491 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 LBPP18428 481 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 MMP12P39900 470 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HNMTP50135 292 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 ART3Q13508 389 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 CUL3Q13618 768 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 FNDC3BQ53EP0 1204 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 SPRED2Q7Z698 418 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 BOCQ9BWV1 1114 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 MRPL1Q9BYD6 325 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 PBX4Q9BYU1 374 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 NSUN3Q9H649 340 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 DYRK4Q9NR20 520 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 GALPQ9UBC7 116 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 COPG1Q9Y678 874 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 KIF26AQ9ULI4 1882 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 MYOFQ9NZM1 2061 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 TMEM233B4DJY2 109 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 E2F3O00716 465 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 NUAK1O60285 661 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 FKBP6O75344 327 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 SIX3O95343 332 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 ANXA5P08758 320 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HIST1H2AGP0C0S8 130 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 ELFN1P0C7U0 828 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 IDO1P14902 403 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HIST1H2ADP20671 130 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 AKT1P31749 480 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 VIPR2P41587 438 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 CDH13P55290 713 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 RBBP7Q16576 425 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 PPP1R3AQ16821 1122 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 ATAT1Q5SQI0 421 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HENMT1Q5T8I9 393 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 CES5AQ6NT32 575 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 AAGABQ6PD74 315 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 GET4Q7L5D6 327 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 PGAM4Q8N0Y7 254 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 C12orf76Q8N812 135 aaPredicted RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 TERB1Q8NA31 727 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 ASZ1Q8WWH4 475 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HIST1H2AHQ96KK5 128 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 CATSPER2Q96P56 530 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 LRRC3BQ96PB8 259 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 HIST1H2AJQ99878 128 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 H2AFJQ9BTM1 129 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 STOML1Q9UBI4 398 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 PTBP2Q9UKA9 531 aaKnown RBP16.11■□□□□ 0.17
LDB3-208ENST00000623007 FIS1Q9Y3D6 152 aa16.11■□□□□ 0.17
LDB3-208ENST00000623007 LOC100653049A0A140TA62 436 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 IQCF5A8MTL0 148 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 PSMD12O00232 456 aaPredicted RBP16.1■□□□□ 0.17
LDB3-208ENST00000623007 KRT34O76011 436 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 AOAHP28039 575 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 AP1S2P56377 157 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 ACTR3P61158 418 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 FASTKQ14296 549 aaKnown RBP16.1■□□□□ 0.17
LDB3-208ENST00000623007 GBX1Q14549 363 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 SMU1Q2TAY7 513 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 FAM46CQ5VWP2 391 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 ANKRD54Q6NXT1 300 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 SNX32Q86XE0 403 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 PCYOX1LQ8NBM8 494 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 MOCOSQ96EN8 888 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
LDB3-208ENST00000623007 DYTNA2CJ06 578 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 A8MX80 341 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 WNT9AO14904 365 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 PLOD1Q02809 727 aaPredicted RBP16.09■□□□□ 0.17
LDB3-208ENST00000623007 RUNX3Q13761 415 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 COQ5Q5HYK3 327 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 TRIM68Q6AZZ1 485 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 HACD2Q6Y1H2 254 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 TECPR1Q7Z6L1 1165 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 DDIASQ8IXT1 998 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 CLDN19Q8N6F1 224 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 POU5F2Q8N7G0 328 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 SUSD6Q92537 303 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 ELSPBP1Q96BH3 223 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 PPP1R36Q96LQ0 422 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 EGFL8Q99944 293 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 NKX2-4Q9H2Z4 354 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 SEMA4BQ9NPR2 832 aaPredicted RBP16.09■□□□□ 0.17
LDB3-208ENST00000623007 PPM1HQ9ULR3 514 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 ANGPTL3Q9Y5C1 460 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 PRSS21Q9Y6M0 314 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 PLXNA2O75051 1894 aa16.09■□□□□ 0.17
LDB3-208ENST00000623007 A0A0U1RQS6 177 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 KPNA3O00505 521 aaPredicted RBP16.08■□□□□ 0.17
LDB3-208ENST00000623007 GPR39O43194 453 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms