RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SPATC1Q76KD6 591 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RALGPS2Q86X27 583 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 LYSMD2Q8IV50 215 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 HDAC2Q92769 488 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 IMP4Q96G21 291 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ITCHQ96J02 903 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 FBXO8Q9NRD0 319 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ZNF99A8MXY4 864 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TAF4O00268 1085 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 UPK1AO00322 258 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RGS13O14921 159 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 IDH3BO43837 385 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 PCMT1P22061 227 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 HRH2P25021 359 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 MRPL19P49406 292 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 CLK3P49761 638 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 PCSK7Q16549 785 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 DESI1Q6ICB0 168 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 KDELC2Q7Z4H8 507 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 OR13J1Q8NGT2 312 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RHEBL1Q8TAI7 183 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ANKRD49Q8WVL7 239 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RPL3LQ92901 407 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 PEX13Q92968 403 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 FCRL2Q96LA5 508 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 KCNA7Q96RP8 456 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 CDK5RAP1Q96SZ6 601 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 SMOC2Q9H3U7 446 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 MOV10Q9HCE1 1003 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 DNAJC15Q9Y5T4 150 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RAD51BO15315 384 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 DYRK3O43781 588 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 MFN2O95140 757 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ODC1P11926 461 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 KCNC1P48547 511 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 FOXA1P55317 472 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 OR4D2P58180 307 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 EMX1Q04741 257 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 LAPTM5Q13571 262 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 COLEC12Q5KU26 742 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 KANK2Q63ZY3 851 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TXNDC11Q6PKC3 985 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 CCDC81Q6ZN84 652 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RFPL4BQ6ZWI9 263 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 EFL1Q7Z2Z2 1120 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 SPATA19Q7Z5L4 167 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 CTU1Q7Z7A3 348 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 CCDC103Q8IW40 242 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TEX37Q96LM6 180 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 BTRCQ9Y297 605 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 UGT2A1Q9Y4X1 527 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 MYLKQ15746 1914 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 MROH6A6NGR9 719 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 LRRC14BA6NHZ5 514 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 SOAT2O75908 522 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 S1PR4O95977 384 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 GSNP06396 782 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 GTF2E2P29084 291 aaKnown RBP12.88□□□□□ -0.35
CHD1L-210ENST00000622533 DIO3P55073 304 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 FSCN1Q16658 493 aaKnown RBP12.88□□□□□ -0.35
CHD1L-210ENST00000622533 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
CHD1L-210ENST00000622533 NLGN2Q8NFZ4 835 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 OR6P1Q8NGX9 317 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 CNIH3Q8TBE1 160 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 ATL1Q8WXF7 558 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 DSN1Q9H410 356 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 PRDM8Q9NQV8 689 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 CARD8Q9Y2G2 431 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 TESMINQ9Y4I5 508 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 OAS3Q9Y6K5 1087 aaKnown RBP12.88□□□□□ -0.35
CHD1L-210ENST00000622533 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 SNX2O60749 519 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 CCNKO75909 580 aa12.88□□□□□ -0.35
CHD1L-210ENST00000622533 GABARAPO95166 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms