RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ABRAQ8N0Z2 381 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 MPP5Q8N3R9 675 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 ZNF366Q8N895 744 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 ATXN7L3BQ96GX2 97 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 STRA6Q9BX79 667 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.16
VPS11-209ENST00000622309 DHX35Q9H5Z1 703 aaKnown RBP7.84□□□□□ -1.16
VPS11-209ENST00000622309 CYP3A43Q9HB55 503 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 NMRAL1Q9HBL8 299 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 PEX16Q9Y5Y5 336 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 DDTLA6NHG4 134 aaPredicted RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 TCP10L2B9ZVM9 353 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 G3V2L1 256 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 FGF18O76093 207 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ASS1P00966 412 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 LTFP02788 710 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CFHP08603 1231 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 PSMA2P25787 234 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 GNA15P30679 374 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CSTF2P33240 577 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS11-209ENST00000622309 CD68P34810 354 aaPredicted RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 RGS7P49802 495 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TPMTP51580 245 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CD47Q08722 323 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 LCN8Q6JVE9 175 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 APOBEC3HQ6NTF7 200 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 HHIPL2Q6UWX4 724 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 KIAA1324Q6UXG2 1013 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 TMPRSS9Q7Z410 1059 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ZBTB33Q86T24 672 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CCDC116Q8IYX3 515 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TTLL6Q8N841 843 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 YIPF7Q8N8F6 280 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 OR4M2Q8NGB6 313 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 DNAJA4Q8WW22 397 aaPredicted RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 KLHL6Q8WZ60 621 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 AURKBQ96GD4 344 aaPredicted RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 ELMO2Q96JJ3 720 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TNIP3Q96KP6 325 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TEKT5Q96M29 485 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 FIZ1Q96SL8 496 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 FTHL17Q9BXU8 183 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 ACAD9Q9H845 621 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ASNSD1Q9NWL6 643 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 FAM50BQ9Y247 325 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 NAV1Q8NEY1 1877 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 PLIN4Q96Q06 1357 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CIB4A0PJX0 185 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ARPC2O15144 300 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 SLC22A5O76082 557 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 LRIG2O94898 1065 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 GNPDA1P46926 289 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 GCNT1Q02742 428 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 EPS8Q12929 822 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 CLCA4Q14CN2 919 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 SGCAQ16586 387 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ASPRV1Q53RT3 343 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ZBTB37Q5TC79 503 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 GLYATQ6IB77 296 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 NIPA1Q7RTP0 329 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 BNIPLQ7Z465 357 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 COMMD7Q86VX2 200 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 TRIM48Q8IWZ4 208 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 PM20D2Q8IYS1 436 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 PLD6Q8N2A8 252 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 EMC1Q8N766 993 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 RIT1Q92963 219 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 INTS12Q96CB8 462 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 SIGLEC10Q96LC7 697 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 RNF145Q96MT1 663 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 SEC22CQ9BRL7 303 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 SLC6A15Q9H2J7 730 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 NIPAL2Q9H841 368 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ERVK13-1Q9NX77 482 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 ING3Q9NXR8 418 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 INTS6Q9UL03 887 aaKnown RBP7.83□□□□□ -1.16
VPS11-209ENST00000622309 PCNTO95613 3336 aa7.83□□□□□ -1.16
VPS11-209ENST00000622309 LINC01387J3KSC0 135 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PPM1BO75688 479 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FTH1P02794 183 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 APOA4P06727 396 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 HOXD4P09016 255 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 ADORA3P0DMS8 318 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ACY1Q03154 408 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 GABPAQ06546 454 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CACNB2Q08289 660 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 ZNF252P-AS1Q0IIN9 211 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ELOAQ14241 798 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 SETMARQ53H47 684 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 ZNF484Q5JVG2 852 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 LIPMQ5VYY2 423 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PRMT9Q6P2P2 845 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TMEM81Q6P7N7 255 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TXNDC11Q6PKC3 985 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 NPNTQ6UXI9 565 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 GALNT5Q7Z7M9 940 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CBWD2Q8IUF1 395 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ZNF540Q8NDQ6 660 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms