RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LIMD1Q9UGP4 676 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 POLG2Q9UHN1 485 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 GNPTGQ9UJJ9 305 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LRRC37AA6NMS7 1700 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 A0A0C4DFX4 3053 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 A0A087X1B8 175 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF487B1APH4 448 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 AQP9O43315 295 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 FTH1P02794 183 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PABPC1P11940 636 aaKnown RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 EDNRBP24530 442 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 GJA5P36382 358 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 NNMTP40261 264 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 NR4A2P43354 598 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 MAP2K4P45985 399 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 RUNX1T1Q06455 604 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SPDYE7PQ495Y7 208 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 KIAA0319Q5VV43 1072 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF773Q6PK81 442 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 THAP5Q7Z6K1 395 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SLC22A16Q86VW1 577 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 C8orf59Q8N0T1 100 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 LGI2Q8N0V4 545 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SPARTQ8N0X7 666 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CRYBG2Q8N1P7 616 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM86AQ8N2M4 240 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ATG16L2Q8NAA4 619 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 OR7A2PQ8NGA2 310 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 NDNFQ8TB73 568 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ROPN1LQ96C74 230 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC126Q96EE4 140 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ALPK1Q96QP1 1244 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 MCMBPQ9BTE3 642 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF556Q9HAH1 456 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 GALPQ9UBC7 116 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 LSM7Q9UK45 103 aaKnown RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PADI3Q9ULW8 664 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 GIT1Q9Y2X7 761 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 Q9Y3F1 56 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 IPPQ9Y573 584 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 COL11A1P12107 1806 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 USP34Q70CQ2 3546 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 A0A0U1RQS6 177 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 C5orf58C9J3I9 102 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 NCAM2O15394 837 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ARHGEF9O43307 516 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 VPS26AO75436 327 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 C1RP00736 705 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 THRBP10828 461 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 DNAJB2P25686 324 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 FMO3P31513 532 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SELPLGQ14242 412 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 MARC1Q5VT66 337 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 XAF1Q6GPH4 301 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 LRRC52Q8N7C0 313 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 RAB2BQ8WUD1 216 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 FBXO32Q969P5 355 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 FEM1CQ96JP0 617 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CINPQ9BW66 212 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 EHD1Q9H4M9 534 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 MRGBPQ9NV56 204 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SEPT3Q9UH03 358 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CBX4O00257 560 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SOCS7O14512 581 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 GLP2RO95838 553 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CST1P01037 141 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PSMD8P48556 350 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ACLYP53396 1101 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 NCS1P62166 190 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 GALNT2Q10471 571 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 OR4D1Q15615 310 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 C11orf96Q7Z7L8 435 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 TBC1D21Q8IYX1 336 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SLC22A17Q8WUG5 538 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 RPL3LQ92901 407 aaKnown RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM125Q96AQ2 219 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PCED1BQ96HM7 432 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 MYOCQ99972 504 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 RHNO1Q9BSD3 238 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 ALOXE3Q9BYJ1 711 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 AMBNQ9NP70 447 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 CD320Q9NPF0 282 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 SARDHQ9UL12 918 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PDE10AQ9Y233 779 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 PCDHGA11Q9Y5H2 935 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 OAS3Q9Y6K5 1087 aaKnown RBP6.88□□□□□ -1.31
NEDD9-216ENST00000620854 COL4A5P29400 1685 aa6.88□□□□□ -1.31
NEDD9-216ENST00000620854 KIAA0100Q14667 2235 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 G3V2T6 193 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CPSF4O95639 269 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms