RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 DEFB133Q30KQ1 61 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 ZNF658BQ4V348 819 aaPredicted RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 AARS2Q5JTZ9 985 aaKnown RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 SDCCAG8Q86SQ7 713 aaPredicted RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 ZBTB9Q96C00 473 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 SLC30A3Q99726 388 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 KLC4Q9NSK0 619 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 CER1O95813 267 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 CSE1LP55060 971 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 HNRNPKP61978 463 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■■□ 21.8
NEK3-210ENST00000620675 GTF2H3Q13889 308 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 SLC29A2Q14542 456 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 BRD3Q15059 726 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 UAP1L1Q3KQV9 507 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 STRA8Q7Z7C7 330 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 CTAGE3PQ8IX95 158 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 KIAA2013Q8IYS2 634 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 CALML6Q8TD86 181 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 PATE1Q8WXA2 126 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 MCMBPQ9BTE3 642 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 ZDHHC5Q9C0B5 715 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 ZCCHC2Q9C0B9 1178 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 SNRNP200O75643 2136 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 PRR19A6NJB7 356 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 C4orf47A7E2U8 309 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 CFAP99D6REC4 459 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 KMOO15229 486 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 AQP9O43315 295 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 TRIM16O95361 564 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 SHBGP04278 402 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 RALBP11234 206 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 CTSEP14091 401 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 RPL10P27635 214 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 ARRB1P49407 418 aaPredicted RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 SEPT7Q16181 437 aaKnown RBP13.41□□□□□ -0.26
NEK3-210ENST00000620675 INSCQ1MX18 579 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 BCL7AQ4VC05 210 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 TCF12Q99081 682 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 ACSS3Q9H6R3 686 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 TBC1D29Q9UFV1 150 aa13.41□□□□□ -0.26
NEK3-210ENST00000620675 WDFY3Q8IZQ1 3526 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 TRIM38O00635 465 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 YY2O15391 372 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 GSTA2P09210 222 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 PDHA2P29803 388 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 CCR7P32248 378 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 GMPRP36959 345 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 ACTR1BP42025 376 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 PREPP48147 710 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 CCT8P50990 548 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 CDKN2DP55273 166 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 ACTR1AP61163 376 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 CYS1Q717R9 158 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 TRMT10CQ7L0Y3 403 aaKnown RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 PIM3Q86V86 326 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 ZC3HC1Q86WB0 502 aaKnown RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 GIMAP7Q8NHV1 300 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 UBLCP1Q8WVY7 318 aaPredicted RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 CAMK1GQ96NX5 476 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 FUT8Q9BYC5 575 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 OSGEPL1Q9H4B0 414 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 INTS10Q9NVR2 710 aaKnown RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 DNAAF2Q9NVR5 837 aaKnown RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 TRNAU1APQ9NX07 287 aaKnown RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 SCHIP1Q9P0W5 487 aaPredicted RBP13.4□□□□□ -0.26
NEK3-210ENST00000620675 GPR34Q9UPC5 381 aa13.4□□□□□ -0.26
NEK3-210ENST00000620675 TRBV23OR9-2A0A075B6M9 112 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 RPS3P23396 243 aaKnown RBP eCLIP13.4□□□□□ -0.27
NEK3-210ENST00000620675 GCAP28676 217 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 STX2P32856 288 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 HSD17B3P37058 310 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 BLKP51451 505 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 ARHGAP8P85298 464 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 PTRHD1Q6GMV3 140 aaKnown RBP13.4□□□□□ -0.27
NEK3-210ENST00000620675 CEP128Q6ZU80 1094 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 AMZ2Q86W34 360 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 VRK3Q8IV63 474 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 LMNTD2Q8IXW0 634 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 OXR1Q8N573 874 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.27
NEK3-210ENST00000620675 TTC1Q99614 292 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 OLFM1Q99784 485 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 SARS2Q9NP81 518 aaKnown RBP13.4□□□□□ -0.27
NEK3-210ENST00000620675 TMEM9BQ9NQ34 198 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 TAAR2Q9P1P5 351 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 SPASTQ9UBP0 616 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms