RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 SPA17Q15506 151 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 PLA2G4EQ3MJ16 856 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SIRPB2Q5JXA9 342 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 ZNF648Q5T619 568 aaPredicted RBP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 KAZNQ674X7 775 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 C11orf63Q6NUN7 778 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 C11orf96Q7Z7L8 435 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 PPP1R3BQ86XI6 285 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 RASGRP3Q8IV61 690 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 CCDC50Q8IVM0 306 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 TTC30BQ8N4P2 665 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 BLOC1S5Q8TDH9 187 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 KLHL6Q8WZ60 621 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 HAUS1Q96CS2 278 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 QKIQ96PU8 341 aaKnown RBP eCLIP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 OR6C1Q96RD1 312 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 APMAPQ9HDC9 416 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 UBP1Q9NZI7 540 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 OGFRQ9NZT2 677 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SEMA5BQ9P283 1151 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 ACSL5Q9ULC5 683 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 AAR2Q9Y312 384 aaKnown RBP11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SPO11Q9Y5K1 396 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 SLC30A1Q9Y6M5 507 aa11.69□□□□□ -0.54
UPF3B-204ENST00000619445 hCG_1818297A0A087WSY0 165 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 C5orf60A6NFR6 353 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 OR52A4PA6NMU1 304 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 C21orf140B9A014 251 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 AURKAO14965 403 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 POP7O75817 140 aaKnown RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 NDUFA10O95299 355 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 IPO7O95373 1038 aaKnown RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 RALBP11234 206 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 NELFEP18615 380 aaKnown RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 NDUFS1P28331 727 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 CD68P34810 354 aaPredicted RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 ARL4DP49703 201 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 ACY1Q03154 408 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 PRPSAP1Q14558 356 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 CCDC181Q5TID7 509 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 IRGCQ6NXR0 463 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 BBS12Q6ZW61 710 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 ZC3H18Q86VM9 953 aaKnown RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 ZNF567Q8N184 647 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 IPMKQ8NFU5 416 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 OR8K5Q8NH50 307 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 HEXDCQ8WVB3 486 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 MRGPRX2Q96LB1 330 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 BPIFA1Q9NP55 256 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 FEZ2Q9UHY8 353 aaPredicted RBP11.68□□□□□ -0.54
UPF3B-204ENST00000619445 PADI1Q9ULC6 663 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 POLHQ9Y253 713 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 HEBP2Q9Y5Z4 205 aa11.68□□□□□ -0.54
UPF3B-204ENST00000619445 MKRN2OSH3BPM6 223 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 NKX2-8O15522 239 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LCA5LO95447 670 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 PRKAR1AP10644 381 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 PECAM1P16284 738 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 MSH3P20585 1137 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LPOP22079 712 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 AKT1P31749 480 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 DLSTP36957 453 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CASRP41180 1078 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SEPHS1P49903 392 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 DRG2P55039 364 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TAF1AQ15573 450 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CHRNA6Q15825 494 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 KHDC1Q4VXA5 237 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 GPRC6AQ5T6X5 926 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 METRNLQ641Q3 311 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 FAM151BQ6UXP7 276 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SIDT2Q8NBJ9 832 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ZNF398Q8TD17 642 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 RSC1A1Q92681 617 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SLC41A2Q96JW4 573 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 GBA3Q9H227 469 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SAE1Q9UBE0 346 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TMPRSS11EQ9UL52 423 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 PCDHGA6Q9Y5G7 932 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 COLEC10Q9Y6Z7 277 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 MGAT4DA6NG13 374 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 H7C0C1 242 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 MATN2O00339 956 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SPAG6O75602 509 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 KIAA0754O94854 1291 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 PRAMEF1O95521 474 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CRTAMO95727 393 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms