RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PNCKQ6P2M8 343 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 ZNF765Q7L2R6 523 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 DEFB119Q8N690 84 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 BEND7Q8N7W2 519 aaPredicted RBP16.06■□□□□ 0.16
SNAP47-213ENST00000617596 SIDT2Q8NBJ9 832 aaKnown RBP16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
SNAP47-213ENST00000617596 FAM45AQ8TCE6 357 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 GPR21Q99679 349 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 GPR174Q9BXC1 333 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 SLC17A7Q9P2U7 560 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 VPS9D1Q9Y2B5 631 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 ACTL7BQ9Y614 415 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 NCOR1O75376 2440 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 OR2AG2A6NM03 316 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 COPEO14579 308 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TRIM16O95361 564 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 MSH3P20585 1137 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 FDXRP22570 491 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 CALB2P22676 271 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 PPARGP37231 505 aaPredicted RBP16.06■□□□□ 0.16
SNAP47-213ENST00000617596 CCNFP41002 786 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 NSG1P42857 185 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 CSRP3P50461 194 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 IRX4P78413 519 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 DMWDQ09019 674 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 LYPLAL1Q5VWZ2 237 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 C16orf46Q6P387 395 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 HEATR4Q86WZ0 1026 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 DDHD1Q8NEL9 900 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 DTX3LQ8TDB6 740 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TCP10LQ8TDR4 215 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 ANKRD49Q8WVL7 239 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TRAPPC9Q96Q05 1148 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 VPS35Q96QK1 796 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 RNPEPL1Q9HAU8 725 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 SGK2Q9HBY8 427 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 GPAMQ9HCL2 828 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TSR3Q9UJK0 312 aaKnown RBP16.06■□□□□ 0.16
SNAP47-213ENST00000617596 TMEM98Q9Y2Y6 226 aa16.06■□□□□ 0.16
SNAP47-213ENST00000617596 PLXNB3Q9ULL4 1909 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 IGLV3-16A0A075B6K0 115 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 LRRC72A6NJI9 287 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 ENO4A6NNW6 628 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 LMNAP02545 664 aaKnown RBP16.05■□□□□ 0.16
SNAP47-213ENST00000617596 ESR1P03372 595 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 CTSCP53634 463 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 ADARP55265 1226 aaKnown RBP16.05■□□□□ 0.16
SNAP47-213ENST00000617596 CLDN2P57739 230 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 DLG1Q12959 904 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 DOK6Q6PKX4 331 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 PHYKPLQ8IUZ5 450 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 RAVER1Q8IY67 606 aaKnown RBP16.05■□□□□ 0.16
SNAP47-213ENST00000617596 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
SNAP47-213ENST00000617596 INPP5DQ92835 1189 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 DCUN1D1Q96GG9 259 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 APOPT1Q96IL0 206 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 YIPF3Q9GZM5 350 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 LRMDAQ9H2I8 198 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 WSB2Q9NYS7 404 aaPredicted RBP16.05■□□□□ 0.16
SNAP47-213ENST00000617596 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
SNAP47-213ENST00000617596 IGHV1OR15-9A0A0B4J2B8 117 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 E5RI56 91 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 H0Y8X5 98 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 K7ESF4 209 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 UNC5CO95185 931 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 IGLV3-19P01714 112 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 ATP1B2P14415 290 aaPredicted RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 CD6P30203 668 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 IGFALSP35858 605 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 TMEM115Q12893 351 aaPredicted RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 DYNC1I2Q13409 638 aaKnown RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 PDAP1Q13442 181 aaKnown RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 WASHC2DQ5SRD0 308 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 NEK5Q6P3R8 708 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 PAQR3Q6TCH7 311 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 SPATA21Q7Z572 469 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 RASGEF1AQ8N9B8 481 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 OR2AG1Q9H205 316 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 SPATA6Q9NWH7 488 aaPredicted RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 FAM8A1Q9UBU6 413 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 GNPTGQ9UJJ9 305 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 TTC28Q96AY4 2481 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 SGTAO43765 313 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 MPOP05164 745 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 RPS3P23396 243 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 ALDH3A1P30838 453 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 GLRBP48167 497 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 POLD2P49005 469 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 CDK3Q00526 305 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 CSHL1Q14406 222 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 AGERQ15109 404 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 MAP7D1Q3KQU3 841 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 LDLRAP1Q5SW96 308 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 CENPLQ8N0S6 344 aaPredicted RBP16.04■□□□□ 0.16
SNAP47-213ENST00000617596 ACMSDQ8TDX5 336 aa16.04■□□□□ 0.16
SNAP47-213ENST00000617596 NXNL1Q96CM4 212 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms