RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ZIC2O95409 532 aaPredicted RBP21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 RBP3P10745 1247 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 CAPZBP47756 277 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 EIF3EP60228 445 aaKnown RBP21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 ITGA9Q13797 1035 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 ITPRIPL1Q6GPH6 555 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 XKR5Q6UX68 686 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 CEACAM20Q6UY09 585 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 AMZ2Q86W34 360 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 TMEM139Q8IV31 216 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 CDKL3Q8IVW4 592 aaPredicted RBP21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 CCDC110Q8TBZ0 833 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 NAT14Q8WUY8 206 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 CALR3Q96L12 384 aaKnown RBP21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 TTC25Q96NG3 672 aa21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 TMEM184BQ9Y519 407 aaPredicted RBP21.8■■□□□ 1.08
NEDD4L-237ENST00000617539 A0A0U1RQJ8 604 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 STX7O15400 261 aaKnown RBP21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 KCNN4O15554 427 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 KIF1CO43896 1103 aaKnown RBP21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 STK17BO94768 372 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 PRAMEF1O95521 474 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 VCLP18206 1134 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 ITGB6P18564 788 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 VAV2P52735 878 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 RWDD2BP57060 319 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 NFE2L1Q14494 772 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 TAF1AQ15573 450 aaPredicted RBP21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 DENND5AQ6IQ26 1287 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 TMEM220Q6QAJ8 160 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 GAS2L3Q86XJ1 694 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 OR4K2Q8NGD2 314 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 CXorf40BQ96DE9 158 aa21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 ZCCHC2Q9C0B9 1178 aaKnown RBP21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 ZNF768Q9H5H4 540 aaKnown RBP21.79■■□□□ 1.08
NEDD4L-237ENST00000617539 LOC101059948A0A1B0GTJ6 334 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 DLGAP3O95886 979 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 AMD1P17707 334 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 LPOP22079 712 aaPredicted RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 NAP1L1P55209 391 aaKnown RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 PPP1CAP62136 330 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 SH3BP2P78314 561 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 RBM12BQ8IXT5 1001 aaKnown RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 KLHDC8BQ8IXV7 354 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 UNC5BQ8IZJ1 945 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 NLGN4XQ8N0W4 816 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 BEND7Q8N7W2 519 aaPredicted RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 NLGN4YQ8NFZ3 816 aaPredicted RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 ZNF398Q8TD17 642 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 RNF31Q96EP0 1072 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 SPATA13Q96N96 652 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 ZPBPQ9BS86 351 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 FKBPLQ9UIM3 349 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 PSMD13Q9UNM6 376 aa21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 SETXQ7Z333 2677 aaKnown RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 ASH1LQ9NR48 2969 aaKnown RBP21.78■■□□□ 1.08
NEDD4L-237ENST00000617539 POLR1CO15160 346 aaPredicted RBP21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 SGTAO43765 313 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 KCNJ13O60928 360 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 IPO7O95373 1038 aaKnown RBP21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 PBLDP30039 288 aaPredicted RBP21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 SEPHS1P49903 392 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 XIAPP98170 497 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 RPE65Q16518 533 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 FNBP1LQ5T0N5 605 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 DARS2Q6PI48 645 aaKnown RBP21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 MICALCLQ6ZW33 695 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 DET1Q7L5Y6 550 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 PRSS42Q7Z5A4 293 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 ARHGAP9Q9BRR9 750 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 STARD5Q9NSY2 213 aa21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 AAR2Q9Y312 384 aaKnown RBP21.77■■□□□ 1.08
NEDD4L-237ENST00000617539 C5orf60A6NFR6 353 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 TOX3O15405 576 aaPredicted RBP21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 SRP72O76094 671 aaKnown RBP21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 ZNF28P17035 718 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 AKT1P31749 480 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 HALP42357 657 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 ZNF140P52738 457 aaPredicted RBP21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 NFATC3Q12968 1075 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 METRNLQ641Q3 311 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 FAM92BQ6ZTR7 304 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 OR13C4Q8NGS5 318 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 EPHA6Q9UF33 1036 aa21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 PACSIN2Q9UNF0 486 aaPredicted RBP21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 DNMT3AQ9Y6K1 912 aaPredicted RBP21.76■■□□□ 1.07
NEDD4L-237ENST00000617539 C2orf81A6NN90 581 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 AGAP14A8MT82 685 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 J3QKU1 62 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 TJP3O95049 919 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 MAP4P27816 1152 aaKnown RBP21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 FOXM1Q08050 763 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 SPARCL1Q14515 664 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 KLHL6Q8WZ60 621 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 SLC45A3Q96JT2 553 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 OR6C1Q96RD1 312 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 FERMT1Q9BQL6 677 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 RAB33BQ9H082 229 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 ASB8Q9H765 288 aa21.75■■□□□ 1.07
NEDD4L-237ENST00000617539 GPN2Q9H9Y4 310 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms