RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 CDKL3Q8IVW4 592 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 GALNT6Q8NCL4 622 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC37A2Q8TED4 501 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 SEC14L1Q92503 715 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 TUBGCP5Q96RT8 1024 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 FMO2Q99518 471 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 DPH5Q9H2P9 285 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 CATSPERBQ9H7T0 1116 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 SIDT1Q9NXL6 827 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 LUZP4Q9P127 313 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 WHRNQ9P202 907 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 WASH4PA8MWX3 477 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 H7C0C1 242 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 SMAPO00193 183 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 FGF10O15520 208 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 CREG1O75629 220 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 STK10O94804 968 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 KRT14P02533 472 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 GRNP28799 593 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 RGRP47804 291 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 ATP5OP48047 213 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 HCAR3P49019 387 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 ARSEP51690 589 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 OTUD4Q01804 1114 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 XRCC4Q13426 336 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 HSP90B2PQ58FF3 399 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 TTC27Q6P3X3 843 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 DARS2Q6PI48 645 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 TP53INP2Q8IXH6 220 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 ACTL9Q8TC94 416 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 AENQ8WTP8 325 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 ATG4AQ8WYN0 398 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 NUS1Q96E22 293 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 COQ10AQ96MF6 247 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC29A3Q9BZD2 475 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 ATP13A3Q9H7F0 1226 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 CWC15Q9P013 229 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 MAP10Q9P2G4 905 aa17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 UBA2Q9UBT2 640 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-209ENST00000616395 PRRC2CQ9Y520 2896 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 HACD1B0YJ81 288 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 MAP3K6O95382 1288 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 IVLP07476 585 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 ERCC2P18074 760 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SERPINA4P29622 427 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SERPINB6P35237 376 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 KCNJ1P48048 391 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 CARSP49589 748 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 YBEYP58557 167 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 MRPS25P82663 173 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 CDK3Q00526 305 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 FOXM1Q08050 763 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 DPYSQ14117 519 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLMAPQ14BN4 828 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 ARHGAP36Q6ZRI8 547 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 UMODL1-AS1Q8N2C9 162 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SFRP1Q8N474 314 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 PAF1Q8N7H5 531 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 ECHDC3Q96DC8 303 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 MOCOSQ96EN8 888 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 STAMBPL1Q96FJ0 436 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 TRIM51Q9BSJ1 452 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC25A23Q9BV35 468 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC39A8Q9C0K1 460 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 ETNK2Q9NVF9 386 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 KCND3Q9UK17 655 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC17A4Q9Y2C5 497 aa17.36■□□□□ 0.37
TRAPPC3-209ENST00000616395 ESYT3A0FGR9 886 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 J3KR12 359 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 EML2O95834 649 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 CD48P09326 243 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 RBP3P10745 1247 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 PRF1P14222 555 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 MAPK9P45984 424 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 NFATC2Q13469 925 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 CASP8Q14790 479 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 CPZQ66K79 652 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC9A4Q6AI14 798 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 DOK6Q6PKX4 331 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 LYSMD3Q7Z3D4 306 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 SRLQ86TD4 932 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 ARHGAP12Q8IWW6 846 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC35B2Q8TB61 432 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 OR2M4Q96R27 311 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 BRD8Q9H0E9 1235 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 PDFQ9HBH1 243 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 PCDH9Q9HC56 1237 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 MLXIPLQ9NP71 852 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 ANAPC5Q9UJX4 755 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 DNPEPQ9ULA0 475 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 SNX24Q9Y343 169 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 PCDHGA6Q9Y5G7 932 aa17.35■□□□□ 0.37
TRAPPC3-209ENST00000616395 HIVEP3Q5T1R4 2406 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 A6NCN8 305 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 DFFAO00273 331 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 PPP1R12AO14974 1030 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms