RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 UROSP10746 265 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 MANFP55145 182 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 WNT7BP56706 349 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 GPAT3Q53EU6 434 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF805Q5CZA5 627 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TRMT10BQ6PF06 316 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ERN2Q76MJ5 926 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ZFYVE19Q96K21 471 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TMLHEQ9NVH6 421 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PCDHGA11Q9Y5H2 935 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 hCG_2014768A0A024R1R8 64 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ATP1B2P14415 290 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 MPSTP25325 297 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 NOS3P29474 1203 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 HNRNPH1P31943 449 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PTPN5P54829 565 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PSME3P61289 254 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TOMM20Q15388 145 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ZC3H7AQ8IWR0 971 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 NRSN1Q8IZ57 195 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 RNF148Q8N7C7 305 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PSKH2Q96QS6 385 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 CCDC28BQ9BUN5 200 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 B4GALT6Q9UBX8 382 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 CDH7Q9ULB5 785 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 IQCF5A8MTL0 148 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 BBIP1A8MTZ0 92 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 OR1F1O43749 312 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 LRATO95237 230 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 EPCAMP16422 314 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 UNC5BQ8IZJ1 945 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TWIST2Q8WVJ9 160 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 R3HDMLQ9H3Y0 253 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 EXOSC4Q9NPD3 245 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 SPAG4Q9NPE6 437 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 EXD2Q9NVH0 621 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 GDE1Q9NZC3 331 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 CYTH4Q9UIA0 394 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ANAPC2Q9UJX6 822 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 MFHAS1Q9Y4C4 1052 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PCDHGB3Q9Y5G1 929 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 SCAMP1O15126 338 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 LRRC26Q2I0M4 334 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PIK3R6Q5UE93 754 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GCNT7Q6ZNI0 430 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 IGSF8Q969P0 613 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 AZIN2Q96A70 460 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 MRM3Q9HC36 420 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 OR51F1A6NGY5 319 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 H3BNH8 94 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 KMOO15229 486 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SERPINB7O75635 380 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PAPSS2O95340 614 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 CBSLP0DN79 551 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 UMPSP11172 480 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 CBSP35520 551 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 RANBP1P43487 201 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 AP1S2P56377 157 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ELAVL3Q14576 367 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SUZ12Q15022 739 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GSTA3Q16772 222 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PM20D1Q6GTS8 502 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 CYP2R1Q6VVX0 501 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PLD3Q8IV08 490 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 MRPL43Q8N983 215 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 OR4A15Q8NGL6 344 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 C7orf26Q96N11 449 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 TSSK3Q96PN8 268 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 NUSAP1Q9BXS6 441 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 KLHL4Q9C0H6 718 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 REEP1Q9H902 201 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SLCO1B3Q9NPD5 702 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 MAP10Q9P2G4 905 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 UBXN8O00124 270 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 NPHS1O60500 1241 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PDE5AO76074 875 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PGLSO95336 258 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ALAS2P22557 587 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GSCP56915 257 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SMIM11AP58511 58 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 PITX1P78337 314 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 RFTN2Q52LD8 501 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 FSTL5Q8N475 847 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 TTLQ8NG68 377 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 FBRSQ9HAH7 460 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 MRPS30Q9NP92 439 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF446Q9NWS9 450 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 HSFX1Q9UBD0 423 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GMEB2Q9UKD1 530 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 LZTS1Q9Y250 596 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 IMPDH2P12268 514 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GRIA1P42261 906 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 HNMTP50135 292 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SUOXP51687 545 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 RUNX1T1Q06455 604 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 BNIP2Q12982 314 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 FBXO43Q4G163 708 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 C9orf64Q5T6V5 341 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms