RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FOXN2P32314 431 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CYP4F2P78329 520 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC173Q0VFZ6 552 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 GPR18Q14330 331 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 FASTKD3Q14CZ7 662 aaKnown RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 PHF19Q5T6S3 580 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 SYT10Q6XYQ8 523 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 PHYKPLQ8IUZ5 450 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CFAP206Q8IYR0 622 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 NDUFAF2Q8N183 169 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 NCSTNQ92542 709 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 SLC30A3Q99726 388 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CASS4Q9NQ75 786 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 TPX2Q9ULW0 747 aaKnown RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 GCN1Q92616 2671 aaKnown RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 IGHV5-10-1A0A0J9YXX1 117 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 ALPPL2P10696 532 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 LMAN1P49257 510 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 SEPHS1P49903 392 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 DCDC1P59894 354 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 C2orf54Q08AI8 447 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CCSMST1Q4G0I0 132 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 NLRP8Q86W28 1048 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 DENND6AQ8IWF6 608 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 TTC13Q8NBP0 860 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 C16orf45Q96MC5 204 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 WWP1Q9H0M0 922 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 ASCL3Q9NQ33 180 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 IMP3Q9NV31 184 aaKnown RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CPNE7Q9UBL6 633 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 KLHL20Q9Y2M5 609 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 COL6A6A6NMZ7 2263 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 C2orf81A6NN90 581 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 E7EVH7 732 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 YKT6O15498 198 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 TTI1O43156 1089 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 PROS1P07225 676 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 IVDP26440 423 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 ACTN2P35609 894 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 SPIDRQ14159 915 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 KCNJ11Q14654 390 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF658BQ4V348 819 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 FAM92BQ6ZTR7 304 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 LRRTM4Q86VH4 590 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 TMPRSS12Q86WS5 348 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 SLITRK4Q8IW52 837 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 NXPE1Q8N323 547 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 FSTL5Q8N475 847 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 LRRN4CLQ8ND94 238 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 DDHD1Q8NEL9 900 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 OR6P1Q8NGX9 317 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC74BQ96LY2 380 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 GSDMCQ9BYG8 508 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 LRRC40Q9H9A6 602 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 NLE1Q9NVX2 485 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 PISDQ9UG56 409 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CRLS1Q9UJA2 301 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 PCDHGA1Q9Y5H4 931 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 FER1L5A0AVI2 2057 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 ADAMTS20P59510 1910 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 RHPN2P1A8MT19 583 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 AGAP14A8MT82 685 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 VAPBO95292 243 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 TIAF1O95411 115 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 FGF3P11487 239 aaPredicted RBP5.59□□□□□ -1.52
CPNE3-208ENST00000614678 F3P13726 295 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 PTGIRP43119 386 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 MAPK10P53779 464 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 PRPSAP1Q14558 356 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 COL28A1Q2UY09 1125 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 PPP1R21Q6ZMI0 780 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 VASH2Q86V25 355 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 DTWD1Q8N5C7 304 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 ACVR1CQ8NER5 493 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 TTC25Q96NG3 672 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 GFM1Q96RP9 751 aaKnown RBP5.59□□□□□ -1.52
CPNE3-208ENST00000614678 CCDC86Q9H6F5 360 aaKnown RBP5.59□□□□□ -1.52
CPNE3-208ENST00000614678 LATS2Q9NRM7 1088 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 VPS18Q9P253 973 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 CRYL1Q9Y2S2 319 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 NFS1Q9Y697 457 aa5.59□□□□□ -1.52
CPNE3-208ENST00000614678 SPTA1P02549 2419 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 C9orf172C9J069 976 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 NRDCO43847 1150 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SUN1O94901 812 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TNFSF15O95150 251 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 PRB1P04280 392 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 KELP23276 732 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ACRV1P26436 265 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 STIP1P31948 543 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CETN2P41208 172 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 LSSP48449 732 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 FOXK2Q01167 660 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CTBP1Q13363 440 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms