RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 POU4F1Q01851 419 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 LRP8Q14114 963 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 KIF19Q2TAC6 998 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 TRIM61Q5EBN2 209 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 CHST15Q7LFX5 561 aaPredicted RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 AMZ2Q86W34 360 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 ZNF547Q8IVP9 402 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 PHACTR4Q8IZ21 702 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 RIBC1Q8N443 379 aaPredicted RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 BEND7Q8N7W2 519 aaPredicted RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 NAT14Q8WUY8 206 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 MTBPQ96DY7 904 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 PDXPQ96GD0 296 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 ZIM3Q96PE6 472 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 OR2M4Q96R27 311 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 RUFY1Q96T51 708 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 NDNQ99608 321 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 TIMM29Q9BSF4 260 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 NUSAP1Q9BXS6 441 aaKnown RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 CAPN10Q9HC96 672 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 SPATS2LQ9NUQ6 558 aaKnown RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 MTO1Q9Y2Z2 717 aaKnown RBP14.47□□□□□ -0.09
CD48-203ENST00000613788 PRKAB1Q9Y478 270 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 SNX11Q9Y5W9 270 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 FANCMQ8IYD8 2048 aa14.47□□□□□ -0.09
CD48-203ENST00000613788 MGAT4DA6NG13 374 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 SMIM23A6NLE4 172 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 IQCF5A8MTL0 148 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 DYNC1I1O14576 645 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 KHNYNO15037 678 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 NIPSNAP2O75323 286 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 SNRPAP09012 282 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 NME1P15531 152 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 SAT1P21673 171 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 SLCO1A2P46721 670 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 HNRNPKP61978 463 aaKnown RBP eCLIP14.46□□□□□ -0.09
CD48-203ENST00000613788 DNAJC3Q13217 504 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 USP10Q14694 798 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 INSCQ1MX18 579 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 ZNF542PQ5EBM4 170 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 RBM20Q5T481 1227 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 MROH9Q5TGP6 573 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 OTOAQ7RTW8 1153 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 C11orf96Q7Z7L8 435 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 DCLK2Q8N568 766 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 OR2L2Q8NH16 312 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 EPS8L3Q8TE67 593 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 ANKRD7Q92527 254 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 TSPAN17Q96FV3 270 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 LATS2Q9NRM7 1088 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 KLHL42Q9P2K6 505 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 APOBEC3BQ9UH17 382 aaKnown RBP14.46□□□□□ -0.09
CD48-203ENST00000613788 SLC39A10Q9ULF5 831 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 GON4LQ3T8J9 2241 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 SPAG17Q6Q759 2223 aa14.46□□□□□ -0.09
CD48-203ENST00000613788 TNRC6BQ9UPQ9 1833 aaKnown RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 PATE3B3GLJ2 98 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 STMN1P16949 149 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ITGB6P18564 788 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ARRB1P49407 418 aaPredicted RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 ARHGAP8P85298 464 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 BNC1Q01954 994 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 PLOD1Q02809 727 aaPredicted RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 ZNF844Q08AG5 666 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ILF3Q12906 894 aaKnown RBP eCLIP14.46□□□□□ -0.1
CD48-203ENST00000613788 KRT71Q3SY84 523 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 PLA2G2CQ5R387 149 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 KCTD16Q68DU8 428 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 HM13Q8TCT9 377 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ASZ1Q8WWH4 475 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ELMO1Q92556 727 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 ELF4Q99607 663 aaPredicted RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 SARS2Q9NP81 518 aaKnown RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 SPASTQ9UBP0 616 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 TBK1Q9UHD2 729 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 KLF15Q9UIH9 416 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 TRMT6Q9UJA5 497 aaKnown RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 PNMA8BQ9ULN7 279 aaPredicted RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 DHRS7Q9Y394 339 aa14.46□□□□□ -0.1
CD48-203ENST00000613788 PCYT1BQ9Y5K3 369 aaPredicted RBP14.46□□□□□ -0.1
CD48-203ENST00000613788 ARHGAP33O14559 1287 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 LIN7AO14910 233 aaPredicted RBP14.45□□□□□ -0.1
CD48-203ENST00000613788 APOA4P06727 396 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 ACP5P13686 325 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 FDXRP22570 491 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 AOAHP28039 575 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 PBLDP30039 288 aaPredicted RBP14.45□□□□□ -0.1
CD48-203ENST00000613788 CCR7P32248 378 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 RXRGP48443 463 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 CDKN2DP55273 166 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 TAS2R39P59534 338 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 DMPKQ09013 629 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 GRIK2Q13002 908 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 PDAP1Q13442 181 aaKnown RBP14.45□□□□□ -0.1
CD48-203ENST00000613788 BMPR2Q13873 1038 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 TMED2Q15363 201 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 ELOCQ15369 112 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms