RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 IRX1P78414 480 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 PLOD1Q02809 727 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 RFTN2Q52LD8 501 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 DGKKQ5KSL6 1271 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 RBM44Q6ZP01 1051 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 GAREM2Q75VX8 874 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ROPN1LQ96C74 230 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 SEPHS2Q99611 448 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 TMEM79Q9BSE2 394 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 SPATS2LQ9NUQ6 558 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ABCD2Q9UBJ2 740 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 POLR3HQ9Y535 204 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 A0A1B0GVG6 124 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CCDC154A6NI56 674 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 STX16O14662 325 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 TAPBPO15533 448 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 AHCYL1O43865 530 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC22A3O75751 556 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CLPTM1O96005 669 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CAPNS1P04632 268 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 HMGCLP35914 325 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 MTPNP58546 118 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 HMGCS1Q01581 520 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 LIPEQ05469 1076 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 VEPH1Q14D04 833 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CHRNA6Q15825 494 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZBTB49Q6ZSB9 765 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CHERPQ8IWX8 916 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 PBXIP1Q96AQ6 731 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ACTL8Q9H568 366 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZFYVE1Q9HBF4 777 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 DUS2Q9NX74 493 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 INTS6Q9UL03 887 aaKnown RBP13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 COL4A6Q14031 1691 aa13.89□□□□□ -0.19
PCDHGA3-202ENST00000612467 A0A1W2PP18 115 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 DHRS12A0PJE2 317 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 GIPC1O14908 333 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 TEX28O15482 410 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 FAM58BPP0C7Q3 252 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 BPIP17213 487 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 PTGER3P43115 390 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CACNG1Q06432 222 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 LMAN2Q12907 356 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 RCAN2Q14206 197 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 PTGR1Q14914 329 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 MYLK3Q32MK0 819 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 DNAJC14Q6Y2X3 702 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLAIN1Q8ND83 568 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 TMIGD2Q96BF3 282 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC2A11Q9BYW1 496 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 IPPKQ9H8X2 491 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 NPIPB15A6NHN6 443 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 FFAR2O15552 330 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 HTRA2O43464 458 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 SEC24DO94855 1032 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 MATN4O95460 622 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 OR4D2P58180 307 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 GTF2H2Q13888 395 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 NR6A1Q15406 480 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CYP51A1Q16850 503 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 GTF2H2CQ6P1K8 395 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CMTM8Q8IZV2 173 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 GALNT15Q8N3T1 639 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 MINDY1Q8N5J2 469 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 EGFL8Q99944 293 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 FAM192AQ9GZU8 254 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CLPBQ9H078 707 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 Q9H521 79 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 ALG2Q9H553 416 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 FAM8A1Q9UBU6 413 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 CD84Q9UIB8 345 aa13.88□□□□□ -0.19
PCDHGA3-202ENST00000612467 A0A1W2PRU2 124 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 B3GALT4O96024 378 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ESR1P03372 595 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 PABPC4LP0CB38 370 aaKnown RBP13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 NANOGP8Q6NSW7 305 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 DET1Q7L5Y6 550 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ADGRG5Q8IZF4 528 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 HJURPQ8NCD3 748 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms