RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TSSK4Q6SA08 328 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 MAMSTRQ6ZN01 415 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 NKAPQ8N5F7 415 aaKnown RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 APOOQ9BUR5 198 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 NMRAL1Q9HBL8 299 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 EMCNQ9ULC0 261 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 H0Y8X5 98 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 MYCLP1P12525 358 aaPredicted RBP17.28■□□□□ 0.36
SREK1-216ENST00000612404 CCR7P32248 378 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 SLC26A3P40879 764 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 WDR4P57081 412 aaKnown RBP17.28■□□□□ 0.36
SREK1-216ENST00000612404 DMWDQ09019 674 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
SREK1-216ENST00000612404 USP39Q53GS9 565 aaKnown RBP17.28■□□□□ 0.36
SREK1-216ENST00000612404 KYAT3Q6YP21 454 aaKnown RBP17.28■□□□□ 0.36
SREK1-216ENST00000612404 LCA5Q86VQ0 697 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 DEFB119Q8N690 84 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 EEF1AKMT1Q8WVE0 214 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 ELMO1Q92556 727 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 FOXJ1Q92949 421 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 LINGO1Q96FE5 620 aa17.28■□□□□ 0.36
SREK1-216ENST00000612404 CACNB4O00305 520 aaPredicted RBP17.27■□□□□ 0.36
SREK1-216ENST00000612404 PBLDP30039 288 aaPredicted RBP17.27■□□□□ 0.36
SREK1-216ENST00000612404 MDH1P40925 334 aaKnown RBP17.27■□□□□ 0.36
SREK1-216ENST00000612404 PRLHRP49683 370 aa17.27■□□□□ 0.36
SREK1-216ENST00000612404 TTLL9Q3SXZ7 439 aa17.27■□□□□ 0.36
SREK1-216ENST00000612404 CRTC3Q6UUV7 619 aa17.27■□□□□ 0.36
SREK1-216ENST00000612404 GPR78Q96P69 363 aa17.27■□□□□ 0.36
SREK1-216ENST00000612404 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.27■□□□□ 0.36
SREK1-216ENST00000612404 MAP3K13O43283 966 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 PLIN3O60664 434 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 ETV4P43268 484 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 KPNA2P52292 529 aaKnown RBP17.27■□□□□ 0.35
SREK1-216ENST00000612404 RPL6Q02878 288 aaKnown RBP17.27■□□□□ 0.35
SREK1-216ENST00000612404 HSPA14Q0VDF9 509 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 CCDC153Q494R4 210 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 LRRC8EQ6NSJ5 796 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 FSTL5Q8N475 847 aaPredicted RBP17.27■□□□□ 0.35
SREK1-216ENST00000612404 ZNF514Q96K75 400 aaPredicted RBP17.27■□□□□ 0.35
SREK1-216ENST00000612404 CCM2Q9BSQ5 444 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 CPSF2Q9P2I0 782 aaKnown RBP17.27■□□□□ 0.35
SREK1-216ENST00000612404 ADAM21Q9UKJ8 722 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 PRKAB1Q9Y478 270 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 GON4LQ3T8J9 2241 aa17.27■□□□□ 0.35
SREK1-216ENST00000612404 WDR91A4D1P6 747 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 C10orf142B7Z368 130 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 PRAMEF26H0Y7S4 382 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 LAMTOR5O43504 91 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 PROCP04070 461 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 CD1DP15813 335 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 DGKAP23743 735 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 AOAHP28039 575 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 RGS4P49798 205 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 BCL7AQ4VC05 210 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 DERL2Q9GZP9 239 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 ALG9Q9H6U8 611 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 LATS2Q9NRM7 1088 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 TK2O00142 265 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 KPNA5O15131 536 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 ZBTB14O43829 449 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 TFEBP19484 476 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 CBX1P83916 185 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 IL9RQ01113 521 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 ACAP2Q15057 778 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 PLA2G4EQ3MJ16 856 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 SYTL3Q4VX76 610 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 ACSBG2Q5FVE4 666 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 GCNT7Q6ZNI0 430 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 BMFQ96LC9 184 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 XPR1Q9UBH6 696 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 ZNHIT2Q9UHR6 403 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 MOSPD1Q9UJG1 213 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 DMTF1Q9Y222 760 aa17.26■□□□□ 0.35
SREK1-216ENST00000612404 TMEM202A6NGA9 273 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 NUAK1O60285 661 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 TSPAN12O95859 305 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 APOA4P06727 396 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 PIWIL4Q7Z3Z4 852 aaKnown RBP17.25■□□□□ 0.35
SREK1-216ENST00000612404 ZNF547Q8IVP9 402 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 TMEM145Q8NBT3 493 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 MRPL57Q9BQC6 102 aaKnown RBP17.25■□□□□ 0.35
SREK1-216ENST00000612404 CAPS2Q9BXY5 557 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 MRPL46Q9H2W6 279 aaKnown RBP17.25■□□□□ 0.35
SREK1-216ENST00000612404 GPR34Q9UPC5 381 aa17.25■□□□□ 0.35
SREK1-216ENST00000612404 A0A1W2PPC4 97 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 BTN3A1O00481 513 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 LILRB5O75023 590 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 NUDT1P36639 197 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 SERPINB4P48594 390 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 FNTBP49356 437 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 ATP6V0D1P61421 351 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 SLC36A4Q6YBV0 504 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 LRRTM4Q86VH4 590 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 MYO1HQ8N1T3 1032 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 CADM4Q8NFZ8 388 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 SKA2Q8WVK7 121 aaPredicted RBP17.24■□□□□ 0.35
SREK1-216ENST00000612404 ASZ1Q8WWH4 475 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 PTERQ96BW5 349 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms