RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 ITPAQ9BY32 194 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 DCSTAMPQ9H295 470 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 BIN3Q9NQY0 253 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 FARSBQ9NSD9 589 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 ZNF490Q9ULM2 529 aaPredicted RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 C21orf2O43822 256 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 APOC3P02656 99 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 NDST1P52848 882 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 C9orf64Q5T6V5 341 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 ADGRD2Q7Z7M1 963 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 ADGRG6Q86SQ4 1221 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 DEFB106AQ8N104 65 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 PNLDC1Q8NA58 520 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 CLP1Q92989 425 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 HIPK3Q9H422 1215 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 LYARQ9NX58 379 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 HMGXB4Q9UGU5 601 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 PCDHB5Q9Y5E4 795 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 SLC18A2Q05940 514 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 PPATQ06203 517 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 BNIP3Q12983 259 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 RBM12BQ8IXT5 1001 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 TMEM246Q9BRR3 403 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 AARSD1Q9BTE6 412 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 TKTL2Q9H0I9 626 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 SGK2Q9HBY8 427 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 EQTNQ9NQ60 294 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 GPRC5CQ9NQ84 441 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 THG1LQ9NWX6 298 aaKnown RBP12.28□□□□□ -0.44
HLCS-207ENST00000612277 KCTD5Q9NXV2 234 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 ASF1AQ9Y294 204 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
HLCS-207ENST00000612277 SYNMO15061 1565 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 TMEM2Q9UHN6 1383 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 MEN1O00255 615 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 AKAP3O75969 853 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 TGM6O95932 706 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 IL7P13232 177 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 CES1P23141 567 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 ACVR2AP27037 513 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 UQCRC1P31930 480 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 CSTF2P33240 577 aaKnown RBP eCLIP12.27□□□□□ -0.441e-6■■■□□ 19.1
HLCS-207ENST00000612277 ZNF132P52740 706 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 E2F1Q01094 437 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 PUM1Q14671 1186 aaKnown RBP eCLIP12.27□□□□□ -0.44
HLCS-207ENST00000612277 ZNF227Q86WZ6 799 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 KIF18BQ86Y91 864 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 ZNF565Q8N9K5 539 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 ACSS3Q9H6R3 686 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 PCDHGA11Q9Y5H2 935 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.44
HLCS-207ENST00000612277 CIB4A0PJX0 185 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 SLC25A27O95847 323 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 CPN2P22792 545 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ICAM3P32942 547 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 PFKPQ01813 784 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 NFE2Q16621 373 aaPredicted RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 COL28A1Q2UY09 1125 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 FBXO47Q5MNV8 452 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 SNAP47Q5SQN1 464 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ANKRD52Q8NB46 1076 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 CHST13Q8NET6 341 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ROPN1LQ96C74 230 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 C7orf50Q9BRJ6 194 aaKnown RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 DENND2DQ9H6A0 471 aaPredicted RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 LRTM1Q9HBL6 345 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 PCDHGB6Q9Y5F9 930 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 A0A087X0B3 334 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 PAEPP09466 180 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 MOGQ16653 247 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 FBXL19Q6PCT2 694 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ZNF550Q7Z398 422 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 MARCH9Q86YJ5 346 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ZNF557Q8N988 423 aaPredicted RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 NMUR2Q9GZQ4 415 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 AGAP5A6NIR3 686 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 RAB4AP20338 218 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 ZNF792Q3KQV3 632 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 NCEH1Q6PIU2 408 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 TMED4Q7Z7H5 227 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 ZNF347Q96SE7 839 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 EBNA1BP2Q99848 306 aaKnown RBP12.27□□□□□ -0.45
HLCS-207ENST00000612277 TUBA1CQ9BQE3 449 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 TVP23BQ9NYZ1 205 aa12.27□□□□□ -0.45
HLCS-207ENST00000612277 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms