RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CCM2Q9BSQ5 444 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 B3GNT4Q9C0J1 378 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 IGHV5-10-1A0A0J9YXX1 117 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 A6NCN8 305 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CDRT15L2A8MXV6 281 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 PFDN6O15212 129 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 NVLO15381 856 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 UBXN7O94888 489 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SUN1O94901 812 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 NDUFS1P28331 727 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 RAB15P59190 212 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CDK16Q00536 496 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 BCL7AQ4VC05 210 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 AARS2Q5JTZ9 985 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ARMC6Q6NXE6 501 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 AFTPHQ6ULP2 937 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CLEC14AQ86T13 490 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ZNF547Q8IVP9 402 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 OR2L2Q8NH16 312 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 HM13Q8TCT9 377 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ZDHHC12Q96GR4 267 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ASPSCR1Q9BZE9 553 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 EIF2B3Q9NR50 452 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SLC23A2Q9UGH3 650 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 TMPRSS11EQ9UL52 423 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 KCTD3Q9Y597 815 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 PCYT1BQ9Y5K3 369 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 C17orf113A0A1B0GUU1 675 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 AGRPO00253 132 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 GPR39O43194 453 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 RASSF9O75901 435 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 EML2O95834 649 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 FTH1P02794 183 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 THRAP10827 490 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 ACRV1P26436 265 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 SLC5A2P31639 672 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 NSG1P42857 185 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 CTSCP53634 463 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 UBE2IP63279 158 aaKnown RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 XIAPP98170 497 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 ITIH4Q14624 930 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 FASTKD1Q53R41 847 aaKnown RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 DCAF12Q5T6F0 453 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 CERS6Q6ZMG9 384 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 SERPINA9Q86WD7 417 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 RCBTB1Q8NDN9 531 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 PEX13Q92968 403 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 LINC00615Q96LM1 132 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 RANBP9Q96S59 729 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 IL22Q9GZX6 179 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 FAM96AQ9H5X1 160 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 RIMKLBQ9ULI2 386 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
CBWD3-208ENST00000612050 COL27A1Q8IZC6 1860 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-208ENST00000612050 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 AGAP14A8MT82 685 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 A8MU76 341 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 GAPDHSO14556 408 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 MAP3K7O43318 606 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 KDM1AO60341 852 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 AP2A2O94973 939 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 OR56A5P0C7T3 313 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 LIPCP11150 499 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 HGFP14210 728 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 RPL22P35268 128 aaKnown RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 SLC19A1P41440 591 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 NPY2RP49146 381 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 PRLHRP49683 370 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ARL4DP49703 201 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 NFE2L1Q14494 772 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 PCID2Q5JVF3 399 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms