RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 C15orf39Q6ZRI6 1047 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 C16orf86Q6ZW13 317 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CREB3L2Q70SY1 520 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 BEND5Q7L4P6 421 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 DSG4Q86SJ6 1040 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HORMAD1Q86X24 394 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RALGPS2Q86X27 583 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 DHFR2Q86XF0 187 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ERO1BQ86YB8 467 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MIB1Q86YT6 1006 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM178BQ8IXR5 827 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM126BQ8IXS8 530 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CPNE9Q8IYJ1 553 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TBC1D21Q8IYX1 336 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLEC4FQ8N1N0 589 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLIP4Q8N3C7 705 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CBR4Q8N4T8 237 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MINDY1Q8N5J2 469 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCDC185Q8N715 623 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PSD4Q8NDX1 1056 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SHCBP1Q8NEM2 672 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR6P1Q8NGX9 317 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACTL9Q8TC94 416 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 BRSK1Q8TDC3 778 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TSPEARQ8WU66 669 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 JPH3Q8WXH2 748 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEMA4DQ92854 862 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 POP5Q969H6 163 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RCN3Q96D15 328 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 YIPF6Q96EC8 236 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PDXPQ96GD0 296 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRMT2BQ96GJ1 504 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TOE1Q96GM8 510 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM80Q96HE8 168 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RCC1LQ96I51 464 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 METTL2AQ96IZ6 378 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ST6GAL2Q96JF0 529 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM84BQ96KN1 310 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 DEPDC7Q96QD5 511 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACCSQ96QU6 501 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MMP19Q99542 508 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 C17orf62Q9BQA9 187 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SYT3Q9BQG1 590 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 EIF2AK1Q9BQI3 630 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM246Q9BRR3 403 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 FEM1AQ9BSK4 669 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CNPY3Q9BT09 278 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NAT9Q9BTE0 207 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MENTQ9BUN1 341 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 BTBD2Q9BX70 525 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 C1QTNF7Q9BXJ2 289 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CALN1Q9BXU9 219 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 DPEP3Q9H4B8 488 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 EPS8L2Q9H6S3 715 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 LRRC4Q9HBW1 653 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANLNQ9NQW6 1124 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP26B1Q9NR63 512 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TBC1D13Q9NVG8 400 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 INTS10Q9NVR2 710 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SMPD3Q9NY59 655 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACTR3BQ9P1U1 418 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 EIF3KQ9UBQ5 218 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MARCOQ9UEW3 520 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HMGXB4Q9UGU5 601 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRMT112Q9UI30 125 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 OSGIN1Q9UJX0 560 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 BAG5Q9UL15 447 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRPC5Q9UL62 973 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MKLN1Q9UL63 735 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 VPS4AQ9UN37 437 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANKRD6Q9Y2G4 727 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHGB2Q9Y5G2 931 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX13Q9Y5W8 968 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SBF2Q86WG5 1849 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NHSQ6T4R5 1651 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PNMA8CA0A1B0GUJ8 204 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLRN2A0PK11 232 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BCLAF3A2AJT9 711 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GOLGA8IPA6NC78 632 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 AGAP5A6NIR3 686 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRPC5OSA6NMA1 111 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BBIP1A8MTZ0 92 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF99A8MXY4 864 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 E7ENX8 843 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 LOC110117498-PIK3R3F6TDL0 507 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 G3V2L1 256 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 H0Y858 1186 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 H0YC42 278 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 H7C0C1 242 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 M0R3G1 203 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCRL2O00421 344 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLK4O00444 970 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZBTB5O15062 677 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANGPT2O15123 496 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEC14L5O43304 696 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GAS7O60861 476 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNJ13O60928 360 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BANF1O75531 89 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms