RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 TGM7Q96PF1 710 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 TBL1YQ9BQ87 522 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 SEMA4CQ9C0C4 833 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 WASH6PQ9NQA3 447 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 ATRXP46100 2492 aa16.08■□□□□ 0.16
TUBE1-206ENST00000603722 C5orf60A6NFR6 353 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 ZNF189O75820 626 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-206ENST00000603722 SRP72O76094 671 aaKnown RBP16.07■□□□□ 0.16
TUBE1-206ENST00000603722 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 MC2RQ01718 297 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 DMPKQ09013 629 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 GPR18Q14330 331 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 NFE2L1Q14494 772 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 FNBP1LQ5T0N5 605 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 BEND7Q8N7W2 519 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-206ENST00000603722 FAM71DQ8N9W8 422 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 TTC13Q8NBP0 860 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 OR13C4Q8NGS5 318 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 RSC1A1Q92681 617 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 NKD1Q969G9 470 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 RTP4Q96DX8 246 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 C9orf72Q96LT7 481 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 ASB8Q9H765 288 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 APMAPQ9HDC9 416 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 SLC40A1Q9NP59 571 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 PSMD13Q9UNM6 376 aa16.07■□□□□ 0.16
TUBE1-206ENST00000603722 R3HDM2Q9Y2K5 976 aaKnown RBP16.07■□□□□ 0.16
TUBE1-206ENST00000603722 ATMQ13315 3056 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 CAPN5O15484 640 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 RAD1O60671 282 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 KCNJ13O60928 360 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 CRTAMO95727 393 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 C9P02748 559 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 ANKRD34CP0C6C1 535 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 CAPZBP47756 277 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 LEPRP48357 1165 aaKnown RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 ZNF140P52738 457 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 KLF1Q13351 362 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 DENND5AQ6IQ26 1287 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 RBM12BQ8IXT5 1001 aaKnown RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 CACNA2D3Q8IZS8 1091 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 IL22RA1Q8N6P7 574 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 ZSCAN1Q8NBB4 408 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 GPR150Q8NGU9 434 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 LRRC45Q96CN5 670 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 TEFMQ96QE5 360 aaKnown RBP16.06■□□□□ 0.16
TUBE1-206ENST00000603722 FAM8A1Q9UBU6 413 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 KALRNO60229 2985 aa16.06■□□□□ 0.16
TUBE1-206ENST00000603722 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 CCL22O00626 93 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 RASSF9O75901 435 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 METTL18O95568 372 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 GDF10P55107 478 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 CYP4F2P78329 520 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 XIAPP98170 497 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 PDE1BQ01064 536 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 MSLNQ13421 630 aaPredicted RBP16.05■□□□□ 0.16
TUBE1-206ENST00000603722 RPE65Q16518 533 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 KIF26BQ2KJY2 2108 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 CEACAM20Q6UY09 585 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 EXTL1Q92935 676 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 HES6Q96HZ4 224 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 ZNF514Q96K75 400 aaPredicted RBP16.05■□□□□ 0.16
TUBE1-206ENST00000603722 TMEM121Q9BTD3 319 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 FAM96AQ9H5X1 160 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 IMP3Q9NV31 184 aaKnown RBP16.05■□□□□ 0.16
TUBE1-206ENST00000603722 SIDT1Q9NXL6 827 aaKnown RBP16.05■□□□□ 0.16
TUBE1-206ENST00000603722 CRLS1Q9UJA2 301 aa16.05■□□□□ 0.16
TUBE1-206ENST00000603722 GOLGA6L6A8MZA4 724 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 POLR1CO15160 346 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 LIFP15018 202 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 SEPHS1P49903 392 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 FOXM1Q08050 763 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 PARP6Q2NL67 630 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 IRGCQ6NXR0 463 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 DUS1LQ6P1R4 473 aaKnown RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 FAM92BQ6ZTR7 304 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 MICALCLQ6ZW33 695 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 KLHDC8BQ8IXV7 354 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 SLC35B2Q8TB61 432 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 DCUN1D1Q96GG9 259 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 DNAJC1Q96KC8 554 aaKnown RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 ZPBPQ9BS86 351 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 ARNT2Q9HBZ2 717 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 FBXO8Q9NRD0 319 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 PILRAQ9UKJ1 303 aa16.04■□□□□ 0.16
TUBE1-206ENST00000603722 CFAP20Q9Y6A4 193 aaKnown RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 DNMT3AQ9Y6K1 912 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-206ENST00000603722 LDB2O43679 373 aa16.03■□□□□ 0.16
TUBE1-206ENST00000603722 KIF1CO43896 1103 aaKnown RBP16.03■□□□□ 0.16
TUBE1-206ENST00000603722 STK17BO94768 372 aa16.03■□□□□ 0.16
TUBE1-206ENST00000603722 ITGB2P05107 769 aa16.03■□□□□ 0.16
TUBE1-206ENST00000603722 MTHFD1P11586 935 aaKnown RBP16.03■□□□□ 0.16
TUBE1-206ENST00000603722 ITGALP20701 1170 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms