RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PLLPQ9Y342 182 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CYP3A4P08684 503 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 GSTT2P0CG29 244 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 GSTT2BP0CG30 244 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 IL7P13232 177 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PSMA1P25786 263 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 FASTKD3Q14CZ7 662 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PRAMEF17Q5VTA0 474 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PYHIN1Q6K0P9 492 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SSX6Q7RTT6 188 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM139Q8IV31 216 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PGAM4Q8N0Y7 254 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 P2RX7Q99572 595 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RIOK2Q9BVS4 552 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PLK2Q9NYY3 685 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SMIM30A4D0T7 59 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 MUSKO15146 869 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SLC22A1O15245 554 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ACSL4O60488 711 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PENKP01210 267 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SCNN1GP51170 649 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 NIPA1Q7RTP0 329 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 APTXQ7Z2E3 356 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 OR5J2Q8NH18 312 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CCDC120Q96HB5 630 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 FZD1Q9UP38 647 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CLUHO75153 1309 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 MCIDASD6RGH6 385 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 GLDCP23378 1020 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ZMYND11Q15326 602 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 HECTD3Q5T447 861 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 COMTD1Q86VU5 262 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 KIAA0319LQ8IZA0 1049 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 NKX2-3Q8TAU0 364 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 LINGO1Q96FE5 620 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF225Q9UK10 706 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 IL23RQ5VWK5 629 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 C1orf186Q6ZWK4 172 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CXorf40AQ8TE69 158 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PMEPA1Q969W9 287 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TMPRSS4Q9NRS4 437 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 GDAP2Q9NXN4 497 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RGPD8O14715 1765 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TBC1D3BA6NDS4 549 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF705EA8MWA4 302 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RPS2P15880 293 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 AXLP30530 894 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 EVI2BP34910 448 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 MAGEA6P43360 314 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TXNL4AP83876 142 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 C12orf29Q8N999 325 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 DPF3Q92784 378 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PANX1Q96RD7 426 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 EBNA1BP2Q99848 306 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PSME2Q9UL46 239 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SLC30A4O14863 429 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SSX5O60225 188 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 MTHFD1P11586 935 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 RPL22P35268 128 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 OAZ1P54368 228 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TSPAN5P62079 268 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SNRPD1P62314 119 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SRFBP1Q8NEF9 429 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 C10orf82Q8WW14 230 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FAIM2Q9BWQ8 316 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 POMPQ9Y244 141 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ITGA2P17301 1181 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF135P52742 658 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TIGD6Q17RP2 521 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 UBR7Q8N806 425 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 BARD1Q99728 777 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 UBQLN2Q9UHD9 624 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 GPN3Q9UHW5 284 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TTC3P53804 2025 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PTPRZ1P23471 2315 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 AZIN1O14977 448 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PDPK1O15530 556 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 STOMP27105 288 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 MAXP61244 160 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 AADACL4Q5VUY2 407 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FAM171BQ6P995 826 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FAM83AQ86UY5 434 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 INO80EQ8NBZ0 244 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 LPPQ93052 612 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 BRD9Q9H8M2 597 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 A0A0J9YYE9 177 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 OTCP00480 354 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SLC15A1P46059 708 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 AMIGO1Q86WK6 493 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SUSD6Q92537 303 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FBXL20Q96IG2 436 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 hCG_2039718K7EN88 272 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SLC28A2O43868 658 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TBL1XO60907 577 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CTSEP14091 401 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms