RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CTSCP53634 463 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 TRAPPC5Q8IUR0 188 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 EEF1AKMT1Q8WVE0 214 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 MAGEB18Q96M61 343 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 MYOCQ99972 504 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 GPR174Q9BXC1 333 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 CCDC134Q9H6E4 229 aa22.24■■□□□ 1.15
IRF3-228ENST00000601291 C6orf106Q9H6K1 298 aaPredicted RBP22.24■■□□□ 1.15
IRF3-228ENST00000601291 CPSF2Q9P2I0 782 aaKnown RBP22.24■■□□□ 1.15
IRF3-228ENST00000601291 MBD1Q9UIS9 605 aaPredicted RBP22.24■■□□□ 1.15
IRF3-228ENST00000601291 WDR91A4D1P6 747 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 GPR89AB7ZAQ6 455 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 TK2O00142 265 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 EIF3FO00303 357 aaPredicted RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 FSBPO95073 299 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 GPR89BP0CG08 455 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 CPA3P15088 417 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 AOAHP28039 575 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 CCR7P32248 378 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 NUDT1P36639 197 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 PXNP49023 591 aaPredicted RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 PDK4Q16654 411 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 TECRLQ5HYJ1 363 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 DOK6Q6PKX4 331 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 MAMSTRQ6ZN01 415 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 MYO1HQ8N1T3 1032 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 SREK1Q8WXA9 508 aaKnown RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 RLN3Q8WXF3 142 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 ELMO1Q92556 727 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 FUBP1Q96AE4 644 aaKnown RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 PDLIM5Q96HC4 596 aaKnown RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 CCM2Q9BSQ5 444 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 TFB2MQ9H5Q4 396 aaKnown RBP22.23■■□□□ 1.15
IRF3-228ENST00000601291 COPG2Q9UBF2 871 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 GPR34Q9UPC5 381 aa22.23■■□□□ 1.15
IRF3-228ENST00000601291 CCDC189A1A4V9 331 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 C10orf142B7Z368 130 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 CACNB4O00305 520 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 ZBTB14O43829 449 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 SHOX2O60902 331 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 NDUFS2O75306 463 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 TSPAN12O95859 305 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 BPGMP07738 259 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 GSTM1P09488 218 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 MYL2P10916 166 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 ENO3P13929 434 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 ZNF8P17098 575 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 LSP1P33241 339 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 GSTM4Q03013 218 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 BOP1Q14137 746 aaKnown RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 SYTL3Q4VX76 610 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 PLEKHS1Q5SXH7 462 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 NUDCD3Q8IVD9 361 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 SPNS2Q8IVW8 549 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 TRIM42Q8IWZ5 723 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 BEND7Q8N7W2 519 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 RHEBL1Q8TAI7 183 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 FOXJ1Q92949 421 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 SPACA7Q96KW9 195 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 UHRF1Q96T88 793 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 APOOQ9BUR5 198 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 LGR4Q9BXB1 951 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 FAM126AQ9BYI3 521 aaPredicted RBP22.22■■□□□ 1.15
IRF3-228ENST00000601291 ALG9Q9H6U8 611 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 DLGAP2Q9P1A6 1054 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 DMTF1Q9Y222 760 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 TMEM98Q9Y2Y6 226 aa22.22■■□□□ 1.15
IRF3-228ENST00000601291 PDGFBP01127 241 aaPredicted RBP22.21■■□□□ 1.15
IRF3-228ENST00000601291 AOC1P19801 751 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 TAC1P20366 129 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 PCLAFQ15004 111 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 ISCA2Q86U28 154 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 LRRC8CQ8TDW0 803 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 ASZ1Q8WWH4 475 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 KIAA1191Q96A73 305 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 K7ESF4 209 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 BTN3A1O00481 513 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 AXIN1O15169 862 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 IGHV4-34P06331 123 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 HSPA14Q0VDF9 509 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 ACSBG2Q5FVE4 666 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 ZYG11AQ6WRX3 759 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.21■■□□□ 1.158e-8■■■□□ 16.6
IRF3-228ENST00000601291 STAG3L4Q8TBR4 150 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 LINC00615Q96LM1 132 aaPredicted RBP22.21■■□□□ 1.15
IRF3-228ENST00000601291 MECRQ9BV79 373 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 PCED1AQ9H1Q7 454 aa22.21■■□□□ 1.15
IRF3-228ENST00000601291 SPATA6Q9NWH7 488 aaPredicted RBP22.21■■□□□ 1.15
IRF3-228ENST00000601291 G3V2L1 256 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 PRAMEF26H0Y7S4 382 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 CHUKO15111 745 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 NUAK1O60285 661 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 HOXC4P09017 264 aaPredicted RBP22.2■■□□□ 1.14
IRF3-228ENST00000601291 KIAA1024LP59773 190 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 CRTC3Q6UUV7 619 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 NAPRTQ6XQN6 538 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 LRRTM4Q86VH4 590 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 TMEM151AQ8N4L1 468 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 FAM160A2Q8N612 972 aaPredicted RBP22.2■■□□□ 1.14
IRF3-228ENST00000601291 RAB3IL1Q8TBN0 382 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms