RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 GPR150Q8NGU9 434 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 CCHCR1Q8TD31 782 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 DTX3LQ8TDB6 740 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 SEC14L1Q92503 715 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 C19orf60Q96EN9 201 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 TRIM11Q96F44 468 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 IMP4Q96G21 291 aaKnown RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 ZNF514Q96K75 400 aaPredicted RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 PPM1MQ96MI6 270 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 LRFN5Q96NI6 719 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 NAP1L5Q96NT1 182 aaPredicted RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 VPS35Q96QK1 796 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 RANBP9Q96S59 729 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 SMAD5Q99717 465 aaKnown RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 BARD1Q99728 777 aaKnown RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 ZSCAN5AQ9BUG6 496 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 NUDT9Q9BW91 350 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 THAP2Q9H0W7 228 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 CHST8Q9H2A9 424 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 PDE7BQ9NP56 450 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 CASS4Q9NQ75 786 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 KCND1Q9NSA2 647 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 ANO10Q9NW15 660 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 TRIM10Q9UDY6 481 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 IP6K2Q9UHH9 426 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 NENFQ9UMX5 172 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 SPO11Q9Y5K1 396 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 TNRC6AQ8NDV7 1962 aaKnown RBP5.98□□□□□ -1.45
VRK3-220ENST00000600259 PCSK5Q92824 1860 aa5.98□□□□□ -1.45
VRK3-220ENST00000600259 FBN2P35556 2912 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 A0A087X0T9 212 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 SSU72P8A0A1W2PR75 194 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 OR5K3A6NET4 321 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ENO4A6NNW6 628 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PDZK1P1A8MUH7 402 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 MEN1O00255 615 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 GAPDHSO14556 408 aaPredicted RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 KRT86O43790 486 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A9O60656 530 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 KCNJ13O60928 360 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 POP7O75817 140 aaKnown RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 RAB40ALP0C0E4 278 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 FAM228BP0C875 321 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 SPTBP11277 2137 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A6P19224 532 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 POU3F2P20265 443 aaPredicted RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A1P22309 533 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A4P22310 534 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 CA4P22748 312 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 RORAP35398 523 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 RPS15P62841 145 aaKnown RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 HSD11B2P80365 405 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ACY1Q03154 408 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 CDK18Q07002 472 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PPIDQ08752 370 aaKnown RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 KRT81Q14533 505 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 NR1I3Q14994 352 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PDK2Q15119 407 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 GPR19Q15760 415 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 CHRNA6Q15825 494 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 SLC14A2Q15849 920 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PLA2G4EQ3MJ16 856 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ZNF569Q5MCW4 686 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 METRNLQ641Q3 311 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 FBXO38Q6PIJ6 1188 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 DSELQ8IZU8 1212 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 TTC30BQ8N4P2 665 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PLD5Q8N7P1 536 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 RASGEF1AQ8N9B8 481 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ANKRD20A12PQ8NF67 263 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 SPATA22Q8NHS9 363 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 RAPGEF5Q92565 580 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 PNPLA2Q96AD5 504 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 CXorf40BQ96DE9 158 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 SNRNP40Q96DI7 357 aaKnown RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 RNF157Q96PX1 679 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 INSM2Q96T92 566 aaPredicted RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 CD180Q99467 661 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ZNF670Q9BS34 389 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ADGRE3Q9BY15 652 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 XPO4Q9C0E2 1151 aaKnown RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 SLC25A51Q9H1U9 297 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A7Q9HAW7 530 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A10Q9HAW8 530 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 UGT1A8Q9HAW9 530 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 IL26Q9NPH9 171 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ACSS2Q9NR19 701 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 LATS2Q9NRM7 1088 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 RAD18Q9NS91 495 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 IL17CQ9P0M4 197 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 LUZP4Q9P127 313 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ANAPC7Q9UJX3 599 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 BTRCQ9Y297 605 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ZNF711Q9Y462 761 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 ZNF451Q9Y4E5 1061 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 TTLL3Q9Y4R7 772 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 DNMT3AQ9Y6K1 912 aaPredicted RBP5.97□□□□□ -1.45
VRK3-220ENST00000600259 PDZD2O15018 2839 aa5.97□□□□□ -1.45
VRK3-220ENST00000600259 A0A1B0GTH6 734 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 LOC285095A0A1B0GVY8 99 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms