RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 XRCC1P18887 633 aaPredicted RBP27.65■■■□□ 2.02
ZNF558-206ENST00000599938 ITPKBP27987 946 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 RPL22P35268 128 aaKnown RBP27.65■■■□□ 2.02
ZNF558-206ENST00000599938 SLC19A1P41440 591 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 HALP42357 657 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 CFHR1Q03591 330 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 GPR33Q49SQ1 333 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 CCDC38Q502W7 563 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 ZRANB3Q5FWF4 1079 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 CLEC14AQ86T13 490 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 JAMLQ86YT9 394 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 REXO1L1PQ8IX06 675 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 NAT14Q8WUY8 206 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 TBC1D10AQ9BXI6 508 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 HOMER3Q9NSC5 361 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 POT1Q9NUX5 634 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 TMEM9Q9P0T7 183 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 ZNF624Q9P2J8 865 aaPredicted RBP27.65■■■□□ 2.02
ZNF558-206ENST00000599938 PTPRQQ9UMZ3 2332 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 AHCTF1Q8WYP5 2266 aa27.65■■■□□ 2.02
ZNF558-206ENST00000599938 MROH6A6NGR9 719 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 HGSO14964 777 aaPredicted RBP27.64■■■□□ 2.02
ZNF558-206ENST00000599938 ITIH1P19827 911 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 MPSTP25325 297 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 GRIA1P42261 906 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 KCNJ1P48048 391 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 TRA2AQ13595 282 aaKnown RBP eCLIP27.64■■■□□ 2.02
ZNF558-206ENST00000599938 NFE2L1Q14494 772 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 BCL7AQ4VC05 210 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 TMEM71Q6P5X7 295 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 FAM83HQ6ZRV2 1179 aaPredicted RBP27.64■■■□□ 2.02
ZNF558-206ENST00000599938 MICALCLQ6ZW33 695 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 KCNE4Q8WWG9 221 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 CXorf40BQ96DE9 158 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 CCDC97Q96F63 343 aaPredicted RBP27.64■■■□□ 2.02
ZNF558-206ENST00000599938 EPB41L1Q9H4G0 881 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 UCK1Q9HA47 277 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 WDR37Q9Y2I8 494 aa27.64■■■□□ 2.02
ZNF558-206ENST00000599938 BASP1P80723 227 aaKnown RBP27.63■■■□□ 2.01
ZNF558-206ENST00000599938 TMEM26Q6ZUK4 368 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 SPACA3Q8IXA5 215 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 PRELID2Q8N945 189 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 HEXDCQ8WVB3 486 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 CDKN2AIPNLQ96HQ2 116 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 CASS4Q9NQ75 786 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 ZDHHC3Q9NYG2 299 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 FAM8A1Q9UBU6 413 aa27.63■■■□□ 2.01
ZNF558-206ENST00000599938 HEATR9A2RTY3 570 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 PRSS56P0CW18 603 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 ACRV1P26436 265 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 CDKN1CP49918 316 aaPredicted RBP27.62■■■□□ 2.01
ZNF558-206ENST00000599938 CACNG1Q06432 222 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 CLCA4Q14CN2 919 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 SKIDA1Q1XH10 827 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 WDR74Q6RFH5 385 aaPredicted RBP27.62■■■□□ 2.01
ZNF558-206ENST00000599938 C4orf22Q6V702 233 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 TAS2R42Q7RTR8 314 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 SERPINA9Q86WD7 417 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 SLC35F6Q8N357 371 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 NCSTNQ92542 709 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 PBKQ96KB5 322 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 EIF2B3Q9NR50 452 aaKnown RBP27.62■■■□□ 2.01
ZNF558-206ENST00000599938 TRMT1Q9NXH9 659 aaKnown RBP27.62■■■□□ 2.01
ZNF558-206ENST00000599938 PSMD13Q9UNM6 376 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 PCDHGA7Q9Y5G6 932 aa27.62■■■□□ 2.01
ZNF558-206ENST00000599938 TRBV5-4A0A0C4DH59 114 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 KLHL33A6NCF5 533 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 MGAT4DA6NG13 374 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 SGTAO43765 313 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 MSNP26038 577 aaKnown RBP27.61■■■□□ 2.01
ZNF558-206ENST00000599938 ETV5P41161 510 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 PRLHRP49683 370 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 ARSDP51689 593 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 MAPK10P53779 464 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 LAMB3Q13751 1172 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 RASGEF1CQ8N431 466 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 OR2L2Q8NH16 312 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 MS4A14Q96JA4 679 aa27.61■■■□□ 2.01
ZNF558-206ENST00000599938 IGLV3-16A0A075B6K0 115 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 KIF5CO60282 957 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 ATP1B2P14415 290 aaPredicted RBP27.6■■■□□ 2.01
ZNF558-206ENST00000599938 SLC5A2P31639 672 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 TLE3Q04726 772 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 SNAP47Q5SQN1 464 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 RBM12BQ8IXT5 1001 aaKnown RBP27.6■■■□□ 2.01
ZNF558-206ENST00000599938 PIANPQ8IYJ0 282 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 AGBL5Q8NDL9 886 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 CRELD1Q96HD1 420 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 LINC00615Q96LM1 132 aaPredicted RBP27.6■■■□□ 2.01
ZNF558-206ENST00000599938 RANBP9Q96S59 729 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 SLC40A1Q9NP59 571 aa27.6■■■□□ 2.01
ZNF558-206ENST00000599938 PRAMEF33A0A0G2JMD5 474 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 UBXN7O94888 489 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 PSMA3P25788 255 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 CSTF2P33240 577 aaKnown RBP eCLIP27.59■■■□□ 2.01
ZNF558-206ENST00000599938 GPR18Q14330 331 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 RPE65Q16518 533 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 METRNLQ641Q3 311 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 OR13J1Q8NGT2 312 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 GPR150Q8NGU9 434 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms