RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, human

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-218	ENST00000598907	KRT14	P02533	472 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	FGF1	P05230	155 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	HLA-DQB2	P05538	268 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZSCAN5DP	P0CG00	497 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	RPL22	P35268	128 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MMP13	P45452	471 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KIAA1024L	P59773	190 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	SNRPD1	P62314	119 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MC2R	Q01718	297 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MTM1	Q13496	603 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MYLK3	Q32MK0	819 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	FAM182A	Q5T1J6	154 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TMEM71	Q6P5X7	295 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	C4orf22	Q6V702	233 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GSTA5	Q7RTV2	222 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PRUNE1	Q86TP1	453 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KLHDC8B	Q8IXV7	354 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PLPP6	Q8IY26	295 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TSEN2	Q8NCE0	465 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CCDC110	Q8TBZ0	833 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MGME1	Q9BQP7	344 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CEP41	Q9BYV8	373 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ULBP3	Q9BZM4	244 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CARS2	Q9HA77	564 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TAAR2	Q9P1P5	351 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KLHL3	Q9UH77	587 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MTOR	P42345	2549 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	FBN3	Q75N90	2809 aa		13.74	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PIPSL	A2A3N6	862 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	EFCAB8	A8MWE9	144 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PPM1D	O15297	605 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	STK10	O94804	968 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GSR	P00390	522 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	IFNB1	P01574	187 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZNF28	P17035	718 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KEL	P23276	732 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	IVD	P26440	423 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	AK4	P27144	223 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	HSPA9	P38646	679 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GPR3	P46089	330 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	LEPR	P48357	1165 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CSNK1D	P48730	415 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TUBB4B	P68371	445 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TMEM52B	Q4KMG9	183 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PID1	Q7Z2X4	250 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	BBS5	Q8N3I7	341 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907		Q8NA96	180 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GALNT6	Q8NCL4	622 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ARRDC2	Q8TBH0	407 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TADA1	Q96BN2	335 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	C19orf60	Q96EN9	201 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	AHCYL2	Q96HN2	611 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	AGAP3	Q96P47	875 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	FCRL5	Q96RD9	977 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GORASP1	Q9BQQ3	440 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZPBP	Q9BS86	351 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GLOD4	Q9HC38	313 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	NT5M	Q9NPB1	228 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PAK5	Q9P286	719 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ENTPD4	Q9Y227	616 aa		13.73	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PRSS38	A1L453	326 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	POLR1C	O15160	346 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	METTL18	O95568	372 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	POP4	O95707	220 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	RGR	P47804	291 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	LIG3	P49916	1009 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MRPS25	P82663	173 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	NIPAL4	Q0D2K0	466 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ELP6	Q0PNE2	266 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ILF3	Q12906	894 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	SEMA5A	Q13591	1074 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZNF235	Q14590	738 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	IHH	Q14623	411 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	KCTD19	Q17RG1	926 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PARP6	Q2NL67	630 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ZRANB3	Q5FWF4	1079 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	C8orf74	Q6P047	294 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	C17orf82	Q86X59	251 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	NRROS	Q86YC3	692 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	APLF	Q8IW19	511 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CCDC89	Q8N998	374 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CCHCR1	Q8TD31	782 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	SEC14L1	Q92503	715 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	IMP4	Q96G21	291 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	NSMCE3	Q96MG7	304 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	ERP44	Q9BS26	406 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	TRIM51	Q9BSJ1	452 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	CINP	Q9BW66	212 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	LGR4	Q9BXB1	951 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GSDMC	Q9BYG8	508 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	SLC25A51	Q9H1U9	297 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	GBA3	Q9H227	469 aa		13.72	□□□□□ -0.21
SHKBP1-218	ENST00000598907	PIGN	O95427	931 aa		13.71	□□□□□ -0.21
SHKBP1-218	ENST00000598907	MMP2	P08253	660 aa		13.71	□□□□□ -0.21

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