RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SLC35B2Q8TB61 432 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 JPH3Q8WXH2 748 aaPredicted RBP14.8□□□□□ -0.04
LIG1-215ENST00000597901 TTC9Q92623 222 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 SGF29Q96ES7 293 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 DDA1Q9BW61 102 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 FBXO8Q9NRD0 319 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 SMOXQ9NWM0 555 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 KLHL3Q9UH77 587 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 FEZ2Q9UHY8 353 aaPredicted RBP14.8□□□□□ -0.04
LIG1-215ENST00000597901 FKBPLQ9UIM3 349 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 AGAP14A8MT82 685 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 STMND1H3BQB6 276 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 PRAMEF1O95521 474 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 C9P02748 559 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 TPH1P17752 444 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 HALP42357 657 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 TMPRSS15P98073 1019 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 PDE1BQ01064 536 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 LONRF2Q1L5Z9 754 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 FNBP1LQ5T0N5 605 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 METRNLQ641Q3 311 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 ANKS6Q68DC2 871 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 IGSF10Q6WRI0 2623 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 FAM83HQ6ZRV2 1179 aaPredicted RBP14.79□□□□□ -0.04
LIG1-215ENST00000597901 VASH2Q86V25 355 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 RBM12BQ8IXT5 1001 aaKnown RBP14.79□□□□□ -0.04
LIG1-215ENST00000597901 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 NKD1Q969G9 470 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 LRRC45Q96CN5 670 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 CXorf40BQ96DE9 158 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 ZNF514Q96K75 400 aaPredicted RBP14.79□□□□□ -0.04
LIG1-215ENST00000597901 C9orf72Q96LT7 481 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 SPRY4Q9C004 299 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 POT1Q9NUX5 634 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 GUCA1BQ9UMX6 200 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 CAPN6Q9Y6Q1 641 aa14.79□□□□□ -0.04
LIG1-215ENST00000597901 MGAT4DA6NG13 374 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 GOLGA6L6A8MZA4 724 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 PSMD3O43242 534 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 LDB2O43679 373 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 AKT1P31749 480 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 STIP1P31948 543 aaKnown RBP14.78□□□□□ -0.04
LIG1-215ENST00000597901 GDF10P55107 478 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 RAB15P59190 212 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 GPR18Q14330 331 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 NFE2L1Q14494 772 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 RPE65Q16518 533 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 DET1Q7L5Y6 550 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 ZNF605Q86T29 641 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 BEND7Q8N7W2 519 aaPredicted RBP14.78□□□□□ -0.04
LIG1-215ENST00000597901 NAT14Q8WUY8 206 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 CTRCQ99895 268 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 C19orf43Q9BQ61 176 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 TMEM121Q9BTD3 319 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 FAM96AQ9H5X1 160 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 PSMD13Q9UNM6 376 aa14.78□□□□□ -0.04
LIG1-215ENST00000597901 CAPN5O15484 640 aaPredicted RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 SGTAO43765 313 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 C1QL1O75973 258 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 ANKRD34CP0C6C1 535 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 WT1P19544 449 aaPredicted RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 HADHAP40939 763 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 ZNF140P52738 457 aaPredicted RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 GFERP55789 205 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 GSDMDP57764 484 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 TAB3Q8N5C8 712 aaPredicted RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 OR2L2Q8NH16 312 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 RTP4Q96DX8 246 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 DCUN1D1Q96GG9 259 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 TGM7Q96PF1 710 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 TEFMQ96QE5 360 aaKnown RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 INSM2Q96T92 566 aaPredicted RBP14.77□□□□□ -0.05
LIG1-215ENST00000597901 TSGA10Q9BZW7 698 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 LRRC40Q9H9A6 602 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 PILRAQ9UKJ1 303 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 ACSL5Q9ULC5 683 aa14.77□□□□□ -0.05
LIG1-215ENST00000597901 MN1Q10571 1320 aaPredicted RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 CCL22O00626 93 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 POLR1CO15160 346 aaPredicted RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 TOX3O15405 576 aaPredicted RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 KRT86O43790 486 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 PBLDP30039 288 aaPredicted RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 LEPRP48357 1165 aaKnown RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 ATP1A2P50993 1020 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 LY6DQ14210 128 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 GPR33Q49SQ1 333 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 BCL7AQ4VC05 210 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 CEACAM20Q6UY09 585 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 SNX20Q7Z614 316 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 CFAP206Q8IYR0 622 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 ZNF843Q8N446 348 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 ZSCAN1Q8NBB4 408 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 HEXDCQ8WVB3 486 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 ATG4AQ8WYN0 398 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 RSC1A1Q92681 617 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 ULK4Q96C45 1275 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 ZDHHC12Q96GR4 267 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 LINC00615Q96LM1 132 aaPredicted RBP14.76□□□□□ -0.05
LIG1-215ENST00000597901 ZPBPQ9BS86 351 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 RAB33BQ9H082 229 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms