RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 IGFL3Q6UXB1 125 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 CERS6Q6ZMG9 384 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF547Q8IVP9 402 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 CARFQ8N187 725 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM28-210ENST00000597618 TRAM1L1Q8N609 369 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 SLC38A9Q8NBW4 561 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 NEK11Q8NG66 645 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF501Q96CX3 271 aaPredicted RBP9.91□□□□□ -0.82
TRIM28-210ENST00000597618 NUP85Q9BW27 656 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 FANCEQ9HB96 536 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 RAD18Q9NS91 495 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM28-210ENST00000597618 TAS2R14Q9NYV8 317 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 NFKBIL1Q9UBC1 381 aaPredicted RBP9.91□□□□□ -0.82
TRIM28-210ENST00000597618 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
TRIM28-210ENST00000597618 OR5K3A6NET4 321 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 F5H423 210 aaPredicted RBP9.9□□□□□ -0.82
TRIM28-210ENST00000597618 IPO13O94829 963 aaKnown RBP9.9□□□□□ -0.82
TRIM28-210ENST00000597618 CDK14O94921 469 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 IGHEP01854 428 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ITGA3P26006 1051 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 RORAP35398 523 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF165P49910 485 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 MYBPC3Q14896 1274 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 NCF4Q15080 339 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 KRT31Q15323 416 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 QPCTQ16769 361 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ZXDCQ2QGD7 858 aaPredicted RBP9.9□□□□□ -0.82
TRIM28-210ENST00000597618 BOLA3Q53S33 107 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 CRB2Q5IJ48 1285 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 FAM69BQ5VUD6 431 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 LCN10Q6JVE6 187 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 FAM198BQ6UWH4 519 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 TRAPPC5Q8IUR0 188 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 SYTL1Q8IYJ3 562 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ZADH2Q8N4Q0 377 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 CLEC1AQ8NC01 280 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 GPR150Q8NGU9 434 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ARRDC2Q8TBH0 407 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 MAML1Q92585 1016 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 HSPH1Q92598 858 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 CLIP3Q96DZ5 547 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 FER1L6-AS2Q96M78 137 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 IP6K3Q96PC2 410 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ADGRE3Q9BY15 652 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 TRIM7Q9C029 511 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 ZFYVE1Q9HBF4 777 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 RBM22Q9NW64 420 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRIM28-210ENST00000597618 SOHLH2Q9NX45 425 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 TRIM10Q9UDY6 481 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 WDR37Q9Y2I8 494 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 PADI2Q9Y2J8 665 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 SCINQ9Y6U3 715 aa9.9□□□□□ -0.82
TRIM28-210ENST00000597618 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 ANKRD66B4E2M5 251 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 C9J4A7 227 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 PRSS44E7EML9 344 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 MATN3O15232 486 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 KCNJ13O60928 360 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 MTX2O75431 263 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 CAPN1P07384 714 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 FERP16591 822 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 IL1R2P27930 398 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 GLRBP48167 497 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 GALNT2Q10471 571 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 GTF2H3Q13889 308 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 KRTAP21-3Q3LHN1 58 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 CT47A1Q5JQC4 288 aaPredicted RBP9.89□□□□□ -0.83
TRIM28-210ENST00000597618 SP5Q6BEB4 398 aaPredicted RBP9.89□□□□□ -0.83
TRIM28-210ENST00000597618 ARMC6Q6NXE6 501 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 Q6ZS92 163 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 C11orf96Q7Z7L8 435 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 MRGPREQ86SM8 312 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 OOSP2Q86WS3 158 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 GALNT16Q8N428 558 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 TTC30BQ8N4P2 665 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 GPR26Q8NDV2 337 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 TEKT4Q8WW24 435 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 INPP5DQ92835 1189 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 FATE1Q969F0 183 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 EID2BQ96D98 161 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 DPH2Q9BQC3 489 aaPredicted RBP9.89□□□□□ -0.83
TRIM28-210ENST00000597618 PCMTD2Q9NV79 361 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 HRASLS2Q9NWW9 162 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 DTLQ9NZJ0 730 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 OSGIN2Q9Y236 505 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 BTRCQ9Y297 605 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 NTNG1Q9Y2I2 539 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 CROCCQ5TZA2 2017 aa9.89□□□□□ -0.83
TRIM28-210ENST00000597618 DCHS2Q6V1P9 2916 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 MFSD11O43934 449 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 ZG16O60844 167 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 HLA-DQB2P05538 268 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 RARAP10276 462 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 EDN3P14138 238 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 CYP2A7P20853 494 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 HNRNPH3P31942 346 aaKnown RBP9.88□□□□□ -0.83
TRIM28-210ENST00000597618 OTX2P32243 289 aa9.88□□□□□ -0.83
TRIM28-210ENST00000597618 HADHAP40939 763 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms