RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 C10orf142B7Z368 130 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 KMOO15229 486 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 BIRC5O15392 142 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 NUAK1O60285 661 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 DNAJC6O75061 913 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 WISP3O95389 354 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 PDGFBP01127 241 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 IGHV4-34P06331 123 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 ZNF8P17098 575 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 CD27P26842 260 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 AOAHP28039 575 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 IGFALSP35858 605 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 THOP1P52888 689 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 KIAA1024LP59773 190 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 IRF9Q00978 393 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 RPL6Q02878 288 aaKnown RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 MPP2Q14168 576 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 SYTL3Q4VX76 610 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TMEM31Q5JXX7 168 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TRIM74Q86UV6 250 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 LRRTM4Q86VH4 590 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 DCP2Q8IU60 420 aaKnown RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 MYO1HQ8N1T3 1032 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 PELI3Q8N2H9 469 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 STAG3L4Q8TBR4 150 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 FUBP1Q96AE4 644 aaKnown RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TMEM159Q96B96 161 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 BIRC7Q96CA5 298 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 LINGO1Q96FE5 620 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 LINC00615Q96LM1 132 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 C1QTNF1Q9BXJ1 281 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 CAPS2Q9BXY5 557 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 MRPL46Q9H2W6 279 aaKnown RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 IGSF5Q9NSI5 407 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TMEM216Q9P0N5 145 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TMCO1Q9UM00 188 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 MED16Q9Y2X0 877 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-209ENST00000597423 TMEM98Q9Y2Y6 226 aa15.01□□□□□ -0.01
TRIM28-209ENST00000597423 PABPN1LA6NDY0 278 aaKnown RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 MGAT4DA6NG13 374 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 SYCE1LA8MT33 242 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 TNFRSF10CO14798 259 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 LIN7AO14910 233 aaPredicted RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 CHUKO15111 745 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 GRID2O43424 1007 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 PLIN3O60664 434 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 POP7O75817 140 aaKnown RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 PROCP04070 461 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CPA3P15088 417 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CCR7P32248 378 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 PRKAA2P54646 552 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 NFATC4Q14934 902 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 KHDC1Q4VXA5 237 aaKnown RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 C16orf46Q6P387 395 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 DOK6Q6PKX4 331 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 TMEM207Q6UWW9 146 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CDHR3Q6ZTQ4 885 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 NEK10Q6ZWH5 1172 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 WDR5BQ86VZ2 330 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 AMZ2Q86W34 360 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 C1orf210Q8IVY1 113 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CPNE9Q8IYJ1 553 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CENPLQ8N0S6 344 aaPredicted RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 PLD6Q8N2A8 252 aaKnown RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 FSTL5Q8N475 847 aaPredicted RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 ARMC2Q8NEN0 867 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 RHEBL1Q8TAI7 183 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 EEF1AKMT1Q8WVE0 214 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 ANKRD49Q8WVL7 239 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 SNX19Q92543 992 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 KIAA1191Q96A73 305 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 CCDC126Q96EE4 140 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 FZD3Q9NPG1 666 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 PRMT8Q9NR22 394 aaPredicted RBP15□□□□□ -0.01
TRIM28-209ENST00000597423 SLC17A7Q9P2U7 560 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 ZNHIT2Q9UHR6 403 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 ADAM21Q9UKJ8 722 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 SLC17A4Q9Y2C5 497 aa15□□□□□ -0.01
TRIM28-209ENST00000597423 MEI4A8MW99 385 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 SGTAO43765 313 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 SMIM24O75264 130 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 TPBGLP0DKB5 382 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 MPC1LP0DKB6 136 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 MYL2P10916 166 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 CD1DP15813 335 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 TFEBP19484 476 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 ETV4P43268 484 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 SERPINB4P48594 390 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 CTSCP53634 463 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 WDR4P57081 412 aaKnown RBP14.99□□□□□ -0.01
TRIM28-209ENST00000597423 CLDN2P57739 230 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 PFN3P60673 137 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 HSPA14Q0VDF9 509 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 OVGP1Q12889 678 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 WDR45BQ5MNZ6 344 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 Q6ZSR6 202 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 LPCAT2Q7L5N7 544 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 BMP8AQ7Z5Y6 402 aa14.99□□□□□ -0.01
TRIM28-209ENST00000597423 LONP2Q86WA8 852 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms