RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 XIAPP98170 497 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 DPTQ07507 201 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 ILF2Q12905 390 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 LRRC14Q15048 493 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 AGERQ15109 404 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 KRT71Q3SY84 523 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 C4orf17Q53FE4 359 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 TEDDM1Q5T9Z0 273 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 KIAA0895LQ68EN5 471 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 STRA8Q7Z7C7 330 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 CILP2Q8IUL8 1156 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 C2CD4AQ8NCU7 369 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 GPR150Q8NGU9 434 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 ZNF398Q8TD17 642 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SNX19Q92543 992 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 KLK6Q92876 244 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SCAMP4Q969E2 229 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 HIC2Q96JB3 615 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 TCF12Q99081 682 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 AGAP2Q99490 1192 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 GPR174Q9BXC1 333 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 C1QTNF2Q9BXJ5 285 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 PCED1AQ9H1Q7 454 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 FAM96AQ9H5X1 160 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SMYD2Q9NRG4 433 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 INTS10Q9NVR2 710 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 MARCH4Q9P2E8 410 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 PSMC3IPQ9P2W1 217 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC24A2Q9UI40 661 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 FBXO5Q9UKT4 447 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 SRPK3Q9UPE1 567 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 UBA6A0AVT1 1052 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CLEC18AA5D8T8 446 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CXorf49A8MYA2 514 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 GAPDHSO14556 408 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CDH16O75309 829 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 NDUFS3O75489 264 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 PIAS1O75925 651 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ACRV1P26436 265 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 AKT1P31749 480 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 AKT2P31751 481 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 NUDT1P36639 197 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 GP5P40197 560 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CD151P48509 253 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 SERPINB9P50453 376 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CSE1LP55060 971 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 MPP1Q00013 466 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 NFATC3Q12968 1075 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CTBP1Q13363 440 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 IRF4Q15306 451 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 TYSND1Q2T9J0 566 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 HES3Q5TGS1 186 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 GALNT7Q86SF2 657 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 PHYKPLQ8IUZ5 450 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 DENND6AQ8IWF6 608 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 NXPE1Q8N323 547 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 RIBC1Q8N443 379 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 GOLGA6L1Q8N7Z2 621 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 DENND6BQ8NEG7 585 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 EPS8L3Q8TE67 593 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC44A1Q8WWI5 657 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ASB12Q8WXK4 309 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ROPN1BQ9BZX4 212 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ZCCHC2Q9C0B9 1178 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 C6orf106Q9H6K1 298 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 ROPN1Q9HAT0 212 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 FBXO6Q9NRD1 293 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 SMOXQ9NWM0 555 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 HEMK1Q9Y5R4 338 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-213ENST00000597325 TRBV5-4A0A0C4DH59 114 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 IQANK1A0A1B0GTG1 560 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 A0A1B0GVT2 93 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 TLDC2A0PJX2 215 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 MEI4A8MW99 385 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 INPP4BO15327 924 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC31A1O15431 190 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 GPR39O43194 453 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A9O60656 530 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 TCEA3O75764 348 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PAK4O96013 591 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 C1QAP02745 245 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PRSS56P0CW18 603 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 RALBP11234 206 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 CDK4P11802 303 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A6P19224 532 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A1P22309 533 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A4P22310 534 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 HNRNPA2B1P22626 353 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms