RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 FAM83EQ2M2I3 478 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 KYAT3Q6YP21 454 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 C1orf210Q8IVY1 113 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CPNE9Q8IYJ1 553 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 NKAPQ8N5F7 415 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 MDM1Q8TC05 714 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 MGARPQ8TDB4 240 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ANKRD49Q8WVL7 239 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 INPP5DQ92835 1189 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 NXNL1Q96CM4 212 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 UBXN10Q96LJ8 280 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 LATS2Q9NRM7 1088 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 IGSF5Q9NSI5 407 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ZNF358Q9NW07 568 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 KLHL42Q9P2K6 505 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 PLLPQ9Y342 182 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 HS3ST3A1Q9Y663 406 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 MUC3AQ02505 3323 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 A6NNZ2 444 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 METTL12A8MUP2 240 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 NUAK1O60285 661 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 CHN1P15882 459 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 CCR7P32248 378 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 FNTBP49356 437 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 IL2P60568 153 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 PFN3P60673 137 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 BOP1Q14137 746 aaKnown RBP14.43□□□□□ -0.1
VRK3-212ENST00000596814 AGAP9Q5VTM2 703 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 CRTC3Q6UUV7 619 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 WDR5BQ86VZ2 330 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 SPATA6LQ8N4H0 392 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 ELMO1Q92556 727 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 BMFQ96LC9 184 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 FAM111AQ96PZ2 611 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 C12orf65Q9H3J6 166 aaKnown RBP14.43□□□□□ -0.1
VRK3-212ENST00000596814 TMEM216Q9P0N5 145 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 GPR34Q9UPC5 381 aa14.43□□□□□ -0.1
VRK3-212ENST00000596814 RUVBL2Q9Y230 463 aaKnown RBP14.43□□□□□ -0.1
VRK3-212ENST00000596814 MEI4A8MW99 385 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 TOR1BO14657 336 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 CHUKO15111 745 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 KPNA5O15131 536 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 MAP3K13O43283 966 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 LILRB5O75023 590 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 BCKDHBP21953 392 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 AOAHP28039 575 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 PBLDP30039 288 aaPredicted RBP14.42□□□□□ -0.1
VRK3-212ENST00000596814 GLRBP48167 497 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 RGS4P49798 205 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 YPEL5P62699 121 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 CSTF1Q05048 431 aaKnown RBP14.42□□□□□ -0.1
VRK3-212ENST00000596814 NFATC4Q14934 902 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 LRRC8EQ6NSJ5 796 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 C16orf46Q6P387 395 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 KLC3Q6P597 504 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 ABI3BPQ7Z7G0 1075 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 LRRTM4Q86VH4 590 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 FBXL6Q8N531 539 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 DEFB119Q8N690 84 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 DTWD2Q8NBA8 298 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 DENND1AQ8TEH3 1009 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 ORAI3Q9BRQ5 295 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 CCM2Q9BSQ5 444 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 UNKQ9C0B0 810 aaKnown RBP14.42□□□□□ -0.1
VRK3-212ENST00000596814 DERL2Q9GZP9 239 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 MLXIPLQ9NP71 852 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 EMCNQ9ULC0 261 aa14.42□□□□□ -0.1
VRK3-212ENST00000596814 TMEM202A6NGA9 273 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 GSTM1P09488 218 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CD1DP15813 335 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 KELP23276 732 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 DGKAP23743 735 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CD27P26842 260 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 HTR1BP28222 390 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 RABIFP47224 123 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 GYS2P54840 703 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 GSTM4Q03013 218 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CCDC153Q494R4 210 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 SYTL3Q4VX76 610 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 PLEKHS1Q5SXH7 462 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 LVRNQ6Q4G3 990 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 NAPRTQ6XQN6 538 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ZNF547Q8IVP9 402 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 MAML2Q8IZL2 1156 aaPredicted RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 CCDC63Q8NA47 563 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 SCYL1Q96KG9 808 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 LINC00615Q96LM1 132 aaPredicted RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 HSPA12BQ96MM6 686 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 GPR78Q96P69 363 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 RMI1Q9H9A7 625 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 NMRAL1Q9HBL8 299 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 INTS9Q9NV88 658 aaKnown RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 SLC17A4Q9Y2C5 497 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 EIF3FO00303 357 aaPredicted RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 GRID2O43424 1007 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms