RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NDUFS3O75489 264 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 DKK1O94907 266 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 CDK4P11802 303 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 SLC2A4P14672 509 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PRLHRP49683 370 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PLTPP55058 493 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 MAZP56270 477 aaKnown RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 GUCY2DQ02846 1103 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 DMPKQ09013 629 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PDIA2Q13087 525 aaKnown RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 BIRC2Q13490 618 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 THOC5Q13769 683 aaKnown RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 HLTFQ14527 1009 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIG1-208ENST00000595758 TRADDQ15628 312 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 LONRF1Q17RB8 773 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 GLE1Q53GS7 698 aaKnown RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 SPANXN3Q5MJ09 141 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 IYDQ6PHW0 289 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 FAM83HQ6ZRV2 1179 aaPredicted RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 C17orf82Q86X59 251 aaPredicted RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 NAGSQ8N159 534 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 ARL14Q8N4G2 192 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIG1-208ENST00000595758 GPR150Q8NGU9 434 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 OR2L2Q8NH16 312 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PATE1Q8WXA2 126 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 ART4Q93070 314 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 TCF12Q99081 682 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 CCM2Q9BSQ5 444 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 CARD6Q9BX69 1037 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 C20orf96Q9NUD7 363 aaPredicted RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 ZC3H7BQ9UGR2 993 aaKnown RBP14.11□□□□□ -0.15
LIG1-208ENST00000595758 CHMP2BQ9UQN3 213 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PRSS21Q9Y6M0 314 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 CACNA1AO00555 2505 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 A6NCN8 305 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 OR5K4A6NMS3 321 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 ESPNB1AK53 854 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 E7ESA3 106 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 QSOX1O00391 747 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 PRMT5O14744 637 aaPredicted RBP14.1□□□□□ -0.15
LIG1-208ENST00000595758 PFDN6O15212 129 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 TRIM16O95361 564 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 GP1BAP07359 652 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 OR56A5P0C7T3 313 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 F3P13726 295 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 GLB1P16278 677 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 RPL10P27635 214 aaKnown RBP14.1□□□□□ -0.15
LIG1-208ENST00000595758 E2F1Q01094 437 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 CBLBQ13191 982 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 NFE2L1Q14494 772 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 CRYMQ14894 314 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 SEPT7Q16181 437 aaKnown RBP14.1□□□□□ -0.15
LIG1-208ENST00000595758 DNTTIP2Q5QJE6 756 aaKnown RBP14.1□□□□□ -0.15
LIG1-208ENST00000595758 RNF187Q5TA31 235 aaPredicted RBP14.1□□□□□ -0.15
LIG1-208ENST00000595758 AGAP9Q5VTM2 703 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 METRNLQ641Q3 311 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 WASH2PQ6VEQ5 465 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 CENPUQ71F23 418 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 ERMP1Q7Z2K6 904 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 ANKMY2Q8IV38 441 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 CFAP206Q8IYR0 622 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 SFRP1Q8N474 314 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 HM13Q8TCT9 377 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 MAPK15Q8TD08 544 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 CFAP36Q96G28 342 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 WASH6PQ9NQA3 447 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 IL1RAPL1Q9NZN1 696 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 LRIT1Q9P2V4 623 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 FAM8A1Q9UBU6 413 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 RNF215Q9Y6U7 377 aa14.1□□□□□ -0.15
LIG1-208ENST00000595758 BPTFQ12830 3046 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 ASXL3Q9C0F0 2248 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 KIR2DS5A0A0G2JLQ3 304 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 A0A0G2JNG1 304 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 C17orf113A0A1B0GUU1 675 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 RHPN2P1A8MT19 583 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 KIR2DS3K7RE56 304 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 NUDT21O43809 227 aaKnown RBP14.09□□□□□ -0.15
LIG1-208ENST00000595758 FTH1P02794 183 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 GSTM1P09488 218 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 OGNP20774 298 aaKnown RBP14.09□□□□□ -0.15
LIG1-208ENST00000595758 GSTM4Q03013 218 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 KIR2DS5Q14953 304 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 TYSND1Q2T9J0 566 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 PERM1Q5SV97 790 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 ZNF470Q6ECI4 717 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 ABRAXAS1Q6UWZ7 409 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 DHRS13Q6UX07 377 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 ZDHHC24Q6UX98 284 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 UNC5AQ6ZN44 842 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 LRRC6Q86X45 466 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 CILP2Q8IUL8 1156 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 LMNTD2Q8IXW0 634 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 FBXO36Q8NEA4 188 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 CALML6Q8TD86 181 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 SLC37A2Q8TED4 501 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms