RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 GPR19Q15760 415 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 ASTE1Q2TB18 679 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 TMEM102Q8N9M5 508 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 AVL9Q8NBF6 648 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 OR8K1Q8NGG5 319 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF514Q96K75 400 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 MAP3K3Q99759 626 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 OR2AG1Q9H205 316 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 RUBCNLQ9H714 662 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 SLC40A1Q9NP59 571 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 C5AR2Q9P296 337 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 COPG2Q9UBF2 871 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 ANAPC7Q9UJX3 599 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 PDZK1P1A8MUH7 402 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 CPNE3O75131 537 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PYGLP06737 847 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 DRG2P55039 364 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 ACY1Q03154 408 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 SMTNL2Q2TAL5 461 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PPP6R3Q5H9R7 873 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PLEKHS1Q5SXH7 462 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 LYPLAL1Q5VWZ2 237 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 SARM1Q6SZW1 724 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 FJX1Q86VR8 437 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF599Q96NL3 588 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 MGME1Q9BQP7 344 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 EPHA6Q9UF33 1036 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PCDHGA10Q9Y5H3 936 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 CSAG2Q9Y5P2 127 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.25
SHKBP1-208ENST00000595726 PKDREJQ9NTG1 2253 aa13.46□□□□□ -0.26
SHKBP1-208ENST00000595726 SPG11Q96JI7 2443 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 HEATR9A2RTY3 570 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 MEN1O00255 615 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 FZD6O60353 706 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 TRBC1P01850 177 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 CAPN1P07384 714 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 TPM1P09493 284 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 IL4RP24394 825 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 ARL4DP49703 201 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 CLCNKAP51800 687 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 SLC25A11Q02978 314 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 DPYSQ14117 519 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 GDF7Q7Z4P5 450 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 UBXN4Q92575 508 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 NLNQ9BYT8 704 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 CARD9Q9H257 536 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 AGPAT4Q9NRZ5 378 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 SEMA5BQ9P283 1151 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 IP6K2Q9UHH9 426 aa13.45□□□□□ -0.26
SHKBP1-208ENST00000595726 PIKFYVEQ9Y2I7 2098 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 SVILO95425 2214 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 E2F3O00716 465 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 MAFKO60675 156 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 LCA5LO95447 670 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 JCHAINP01591 159 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 RAB40ALP0C0E4 278 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 RARAP10276 462 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF30P17039 623 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ITGA3P26006 1051 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 OTX2P32243 289 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 HCAR3P49019 387 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 EPHB1P54762 984 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 RRADP55042 308 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 TBX2Q13207 712 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 TESK1Q15569 626 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 INSCQ1MX18 579 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 BOLA3Q53S33 107 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 HENMT1Q5T8I9 393 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 Q6ZS92 163 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 BPHLQ86WA6 291 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 CNGA4Q8IV77 575 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 TEKT4Q8WW24 435 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms