RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 TRA2AQ13595 282 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 SEPT6Q14141 434 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 POU6F1Q14863 301 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 CCNG2Q16589 344 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 DRICH1Q6PGQ1 229 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 TMEM220Q6QAJ8 160 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 ABRAXAS1Q6UWZ7 409 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 WASH2PQ6VEQ5 465 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 SNX20Q7Z614 316 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 AMZ2Q86W34 360 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 TRIM48Q8IWZ4 208 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 NXPE1Q8N323 547 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 CCDC89Q8N998 374 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 RCBTB1Q8NDN9 531 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 AHCYL2Q96HN2 611 aaKnown RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 NAF1Q96HR8 494 aaKnown RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 EPB41L1Q9H4G0 881 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 UCK1Q9HA47 277 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 ETNK1Q9HBU6 452 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 WASH6PQ9NQA3 447 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 POT1Q9NUX5 634 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 AKAP7Q9P0M2 348 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 TMEM9Q9P0T7 183 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 ZNF624Q9P2J8 865 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-205ENST00000595028 ZKSCAN5Q9Y2L8 839 aa14.84□□□□□ -0.03
TRIM28-205ENST00000595028 TEX15Q9BXT5 2789 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 H7C0S8 307 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 ERVH48-1M5A8F1 160 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 AGRPO00253 132 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 SUN1O94901 812 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 VIPP01282 170 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 ETS1P14921 441 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TPH1P17752 444 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 XRCC1P18887 633 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 ITIH1P19827 911 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 RPL10P27635 214 aaKnown RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 ETV5P41161 510 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 SLC19A1P41440 591 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 PPM1FP49593 454 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 CXADRP78310 365 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 CDH17Q12864 832 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 SEMA5AQ13591 1074 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 BCL7AQ4VC05 210 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TAF1BQ53T94 588 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 FNBP1LQ5T0N5 605 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TMEM71Q6P5X7 295 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 FAM83HQ6ZRV2 1179 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TMEM26Q6ZUK4 368 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 DET1Q7L5Y6 550 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 PRUNE1Q86TP1 453 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 JAMLQ86YT9 394 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 GLIS1Q8NBF1 620 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 MAIP1Q8WWC4 291 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 CCDC97Q96F63 343 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TBC1D10AQ9BXI6 508 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 NLE1Q9NVX2 485 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 PAK5Q9P286 719 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 PDP2Q9P2J9 529 aa14.83□□□□□ -0.04
TRIM28-205ENST00000595028 DNMT3AQ9Y6K1 912 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-205ENST00000595028 TRBV5-4A0A0C4DH59 114 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 OR52A4PA6NMU1 304 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 E7EVH7 732 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 CEP104O60308 925 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 MPSTP25325 297 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-205ENST00000595028 SLC5A2P31639 672 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 HALP42357 657 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 MAPK9P45984 424 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 LMAN1P49257 510 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 NFE2L1Q14494 772 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 GPR33Q49SQ1 333 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 WDR74Q6RFH5 385 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-205ENST00000595028 BEND7Q8N7W2 519 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-205ENST00000595028 STYXQ8WUJ0 223 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 NAT14Q8WUY8 206 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 HEXDCQ8WVB3 486 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 SGF29Q96ES7 293 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 DCUN1D1Q96GG9 259 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 COPS8Q99627 209 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 DPH1Q9BZG8 443 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 SEMA4CQ9C0C4 833 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 FAM96AQ9H5X1 160 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 RAB6BQ9NRW1 208 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 ACSL6Q9UKU0 697 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 WDR37Q9Y2I8 494 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 SLC30A1Q9Y6M5 507 aa14.82□□□□□ -0.04
TRIM28-205ENST00000595028 MN1Q10571 1320 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-205ENST00000595028 UBR5O95071 2799 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-205ENST00000595028 MGAT4DA6NG13 374 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 MROH6A6NGR9 719 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 CFAP99D6REC4 459 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 NVLO15381 856 aaKnown RBP14.81□□□□□ -0.04
TRIM28-205ENST00000595028 SGTAO43765 313 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 RALBP11234 206 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 PSMA3P25788 255 aa14.81□□□□□ -0.04
TRIM28-205ENST00000595028 ACRV1P26436 265 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms