RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AARSD1Q9BTE6 412 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CDC14AQ9UNH5 594 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CDYLQ9Y232 598 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 GPR39O43194 453 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 SRP72O76094 671 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 RHOBTB1O94844 696 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PRAMEF12O95522 483 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 ALPIP09923 528 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 LINC00271P0C7V0 271 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CD1DP15813 335 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 ZNF37AP17032 561 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PIK3R1P27986 724 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 GKP32189 559 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 NR1D2Q14995 579 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 ZRANB3Q5FWF4 1079 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CAMK1DQ8IU85 385 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 LPGAT1Q92604 370 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CCDC126Q96EE4 140 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CNDP2Q96KP4 475 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 TCF25Q9BQ70 676 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PSD2Q9BQI7 771 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 C2orf49Q9BVC5 232 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 TNFRSF12AQ9NP84 129 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 HCFC1R1Q9NWW0 138 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 VTI1BQ9UEU0 232 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 MAFFQ9ULX9 164 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 H3BMM5 538 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 PFDN6O15212 129 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 OR1I1O60431 355 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 ADH1AP07327 375 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC26A3P40879 764 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 HERC3Q15034 1050 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 DCAF4L2Q8NA75 395 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 PLXNA4Q9HCM2 1894 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 INTS10Q9NVR2 710 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 CXXC1Q9P0U4 656 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 CARNS1A5YM72 827 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 HIDE1A8MVS5 230 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 SLCO1B7G3V0H7 640 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 SUPT7LO94864 414 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 CDH15P55291 814 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 ERVFC1P60507 584 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 PTPRNQ16849 979 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 ANKRD26P1Q6NSI1 321 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 LILRA6Q6PI73 481 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 XKR5Q6UX68 686 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 ELMOD1Q8N336 334 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
SHKBP1-205ENST00000594973 FOXD2O60548 495 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 JAK1P23458 1154 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CD70P32970 193 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 HK2P52789 917 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 LMAN2Q12907 356 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 OR4D1Q15615 310 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 RETSATQ6NUM9 610 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 PAQR3Q6TCH7 311 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CCDC149Q6ZUS6 474 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 HTR3DQ70Z44 454 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CUZD1Q86UP6 607 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 SNX32Q86XE0 403 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC22A9Q8IVM8 553 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 FAM217AQ8IXS0 508 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 PDPRQ8NCN5 879 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 C1orf50Q9BV19 199 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 NPLQ9BXD5 320 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 TNKS2Q9H2K2 1166 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 MRPL40Q9NQ50 206 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 RIC8BQ9NVN3 520 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 EVLQ9UI08 416 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CCL26Q9Y258 94 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 MED16Q9Y2X0 877 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 MYO7AQ13402 2215 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 LEFTY2O00292 366 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 HTRA2O43464 458 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CCR2P41597 374 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC7A9P82251 487 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 PHKG1Q16816 387 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 TRIM16LQ309B1 348 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 PLPP4Q5VZY2 271 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 TAS2R42Q7RTR8 314 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 MINDY2Q8NBR6 621 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 DUS3LQ96G46 650 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 RPL10LQ96L21 214 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 UHRF1Q96T88 793 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 CTRCQ99895 268 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 GPR63Q9BZJ6 419 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 EML4Q9HC35 981 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 ASAH2Q9NR71 780 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 TAS2R13Q9NYV9 303 aa16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 DNMT3BQ9UBC3 853 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-205ENST00000594973 GALPQ9UBC7 116 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms