RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ATXN7L1Q9ULK2 861 aaPredicted RBP21.52■■□□□ 1.04
HOMER3-206ENST00000594439 SOX13Q9UN79 622 aa21.52■■□□□ 1.04
HOMER3-206ENST00000594439 ENTPD2Q9Y5L3 495 aa21.52■■□□□ 1.04
HOMER3-206ENST00000594439 XRCC1P18887 633 aaPredicted RBP21.51■■□□□ 1.03
HOMER3-206ENST00000594439 SLC19A1P41440 591 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 PRAMEP78395 509 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 KIF26BQ2KJY2 2108 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 ARMC3Q5W041 872 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 METRNLQ641Q3 311 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 ZNF761Q86XN6 746 aaPredicted RBP21.51■■□□□ 1.03
HOMER3-206ENST00000594439 PPIL6Q8IXY8 311 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 MPP5Q8N3R9 675 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 OR2L2Q8NH16 312 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 RUNDC3BQ96NL0 473 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 SERPINB12Q96P63 405 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 NRSN2Q9GZP1 204 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 ASIC3Q9UHC3 531 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 WDR37Q9Y2I8 494 aa21.51■■□□□ 1.03
HOMER3-206ENST00000594439 IGHV1OR21-1A0A087WYE8 117 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 KLHL33A6NCF5 533 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 GOLGA8MH3BSY2 632 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 DNALI1O14645 258 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-206ENST00000594439 IVDP26440 423 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 CD1CP29017 333 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 MAGEA3P43357 314 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 SEMA3AQ14563 771 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 CLCA4Q14CN2 919 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 RTP5Q14D33 572 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 AMZ1Q400G9 498 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 CES3Q6UWW8 571 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 PACS1Q6VY07 963 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 TMPRSS9Q7Z410 1059 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 B3GNT8Q7Z7M8 397 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 CLDN19Q8N6F1 224 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 AVL9Q8NBF6 648 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.5■■□□□ 1.03
HOMER3-206ENST00000594439 SH3KBP1Q96B97 665 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 GRAMD1AQ96CP6 724 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 SLC38A3Q99624 504 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 STN1Q9H668 368 aaKnown RBP21.5■■□□□ 1.03
HOMER3-206ENST00000594439 PRSS21Q9Y6M0 314 aa21.5■■□□□ 1.03
HOMER3-206ENST00000594439 ZW10O43264 779 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 AP2A2O94973 939 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 ARNTP27540 789 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 NSG1P42857 185 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 DR1Q01658 176 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 SQSTM1Q13501 440 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 CLPPQ16740 277 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 ZNF658BQ4V348 819 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 FASTKD1Q53R41 847 aaKnown RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 LYPLAL1Q5VWZ2 237 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 CERS6Q6ZMG9 384 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 SYDE1Q6ZW31 735 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 JAMLQ86YT9 394 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 HM13Q8TCT9 377 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 MFSD3Q96ES6 412 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 ATXN7L3BQ96GX2 97 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 KCNK4Q9NYG8 393 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 MARCH4Q9P2E8 410 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 IGF2RP11717 2491 aa21.49■■□□□ 1.03
HOMER3-206ENST00000594439 MAP1BP46821 2468 aaKnown RBP21.49■■□□□ 1.03
HOMER3-206ENST00000594439 C17orf113A0A1B0GUU1 675 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 A0A1W2PNU3 283 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-206ENST00000594439 TMEM8BA6NDV4 472 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 SDR42E2A6NKP2 422 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 OR52A4PA6NMU1 304 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 CPNE6O95741 557 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 VIPP01282 170 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 ZFP36L1Q07352 338 aaKnown RBP21.48■■□□□ 1.03
HOMER3-206ENST00000594439 NKAIN2Q5VXU1 208 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 USP53Q70EK8 1073 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 AGGF1Q8N302 714 aaeCLIP21.48■■□□□ 1.03
HOMER3-206ENST00000594439 LILRA3Q8N6C8 439 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-206ENST00000594439 KDF1Q8NAX2 398 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-206ENST00000594439 MDM1Q8TC05 714 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 NXPE2Q96DL1 559 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 NUDT22Q9BRQ3 303 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 CCM2Q9BSQ5 444 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 FOXP3Q9BZS1 431 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 UCK1Q9HA47 277 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 CATSPERZQ9NTU4 200 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 DKK4Q9UBT3 224 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 FAM8A1Q9UBU6 413 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 ACSL5Q9ULC5 683 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 PSMD13Q9UNM6 376 aa21.48■■□□□ 1.03
HOMER3-206ENST00000594439 PRAMEF33A0A0G2JMD5 474 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CD3EAPO15446 510 aaKnown RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TTI1O43156 1089 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 OR1I1O60431 355 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CCKBRP32239 447 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 HALP42357 657 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 INHBCP55103 352 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 GPLD1P80108 840 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CFHR1Q03591 330 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CYP4F3Q08477 520 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 RPE65Q16518 533 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 MAP9Q49MG5 647 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 IZUMO3Q5VZ72 239 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TMEM26Q6ZUK4 368 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms