RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 OR4L1Q8NH43 312 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 NXPE2Q96DL1 559 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 SGSM3Q96HU1 749 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 KIFC1Q9BW19 673 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 NRSN2Q9GZP1 204 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 XAB2Q9HCS7 855 aaKnown RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 ATXN7L1Q9ULK2 861 aaPredicted RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 WDR37Q9Y2I8 494 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 FRYQ5TBA9 3013 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 IGHV1OR21-1A0A087WYE8 117 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 TMEM8BA6NDV4 472 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 GOLGA8MH3BSY2 632 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 DNALI1O14645 258 aaPredicted RBP14.29□□□□□ -0.12
VRK3-206ENST00000594090 ZW10O43264 779 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 PROS1P07225 676 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 XRCC1P18887 633 aaPredicted RBP14.29□□□□□ -0.12
VRK3-206ENST00000594090 NSG1P42857 185 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 MAGEA3P43357 314 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 DR1Q01658 176 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 CLCA4Q14CN2 919 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 AMZ1Q400G9 498 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 FASTKD1Q53R41 847 aaKnown RBP14.29□□□□□ -0.12
VRK3-206ENST00000594090 LYPLAL1Q5VWZ2 237 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 ARMC3Q5W041 872 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 XKR5Q6UX68 686 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
VRK3-206ENST00000594090 B3GNT8Q7Z7M8 397 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 MPP5Q8N3R9 675 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 MDM1Q8TC05 714 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 HM13Q8TCT9 377 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 GRAMD1AQ96CP6 724 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 MFSD3Q96ES6 412 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 ATXN7L3BQ96GX2 97 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 SLC38A3Q99624 504 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 KCNK4Q9NYG8 393 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
VRK3-206ENST00000594090 FAM8A1Q9UBU6 413 aa14.29□□□□□ -0.12
VRK3-206ENST00000594090 OR52A4PA6NMU1 304 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 AP2A2O94973 939 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CD1CP29017 333 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 SLC19A1P41440 591 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 HALP42357 657 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 GPLD1P80108 840 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 SEMA3AQ14563 771 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 RTP5Q14D33 572 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
VRK3-206ENST00000594090 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CERS6Q6ZMG9 384 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 TMPRSS9Q7Z410 1059 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 TRIM48Q8IWZ4 208 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CLDN19Q8N6F1 224 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
VRK3-206ENST00000594090 TMEM74Q96NL1 305 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 TTC1Q99614 292 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 NUDT22Q9BRQ3 303 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 FOXP3Q9BZS1 431 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 VPS37BQ9H9H4 285 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 RDH14Q9HBH5 336 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 CATSPERZQ9NTU4 200 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 POT1Q9NUX5 634 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 MARCH4Q9P2E8 410 aaPredicted RBP14.28□□□□□ -0.12
VRK3-206ENST00000594090 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 PRSS21Q9Y6M0 314 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 FREM2Q5SZK8 3169 aa14.28□□□□□ -0.12
VRK3-206ENST00000594090 C17orf113A0A1B0GUU1 675 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 QSOX1O00391 747 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 TTI1O43156 1089 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CPNE6O95741 557 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 VIPP01282 170 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CAPNS1P04632 268 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 IVDP26440 423 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 ARNTP27540 789 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CCKBRP32239 447 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CSF2RBP32927 897 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 EPHA4P54764 986 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 INHBCP55103 352 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 DHX34Q14147 1143 aaKnown RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 ZNF658BQ4V348 819 aaPredicted RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CES3Q6UWW8 571 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 PCGF5Q86SE9 256 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 SLITRK4Q8IW52 837 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 LILRA3Q8N6C8 439 aaPredicted RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 KDF1Q8NAX2 398 aaPredicted RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 OR10G6Q8NH81 332 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 ZCCHC14Q8WYQ9 949 aaKnown RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 CXorf40BQ96DE9 158 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 LIN37Q96GY3 246 aaPredicted RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 TRIM51Q9BSJ1 452 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 CCM2Q9BSQ5 444 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 CCDC86Q9H6F5 360 aaKnown RBP14.27□□□□□ -0.12
VRK3-206ENST00000594090 COG4Q9H9E3 785 aa14.27□□□□□ -0.12
VRK3-206ENST00000594090 UCK1Q9HA47 277 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms