RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 GTPBP1O00178 669 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 KRT33AO76009 404 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 IFNGP01579 166 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 CCNYL3P0C7X3 344 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 DSC2Q02487 901 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 RFTN1Q14699 578 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 MON1BQ7L1V2 547 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF461Q8TAF7 563 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PNPT1Q8TCS8 783 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 KCTD13Q8WZ19 329 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 HMCESQ96FZ2 354 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 FBXW11Q9UKB1 542 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PGRMC2O15173 223 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 LRCH4O75427 683 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 DHFRP00374 187 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 HLA-DQA2P01906 255 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 KCNE1P15382 129 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 CPSF6Q16630 551 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 TIGD2Q4W5G0 525 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 LIN52Q52LA3 116 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 ADGRF1Q5T601 910 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 ATG14Q6ZNE5 492 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 OR52K2Q8NGK3 314 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 BRSK1Q8TDC3 778 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 LCN9Q8WX39 176 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 MECRQ9BV79 373 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PACSIN3Q9UKS6 424 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC22A2O15244 555 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 CSF2RAP15509 400 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 ASMTP46597 345 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 LSM3P62310 102 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PTGES3Q15185 160 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 CARD16Q5EG05 197 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PHF11Q9UIL8 331 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 PCDHGC4Q9Y5F7 938 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 TULP3O75386 442 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 UGT1A5P35504 534 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 MTTPP55157 894 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ECT2LQ008S8 904 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GPR17Q13304 367 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ZYG11AQ6WRX3 759 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ADGRE2Q9UHX3 823 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 POLR3HQ9Y535 204 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 BTN3A3O00478 584 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CHST10O43529 356 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 HADHBP55084 474 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GMFBP60983 142 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 MBLAC2Q68D91 279 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ISLR2Q6UXK2 745 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 BADQ92934 168 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 TLCD1Q96CP7 247 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GBA3Q9H227 469 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 HEBP2Q9Y5Z4 205 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC25A12O75746 678 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 RAB15P59190 212 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CCNIQ14094 377 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ESRP1Q6NXG1 681 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CIR1Q86X95 450 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 PIH1D2Q8WWB5 315 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 NPAS2Q99743 824 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 RGS10O43665 173 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GNPDA1P46926 289 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 OMPP47874 163 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GBE1Q04446 702 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 BLMHQ13867 455 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 CMC1Q7Z7K0 106 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ADGRG2Q8IZP9 1017 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 AHI1Q8N157 1196 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ROPN1LQ96C74 230 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 HAPLN3Q96S86 360 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 C3orf14Q9HBI5 128 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms