RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 RHOT1Q8IXI2 618 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 RBM12BQ8IXT5 1001 aaKnown RBP10.23□□□□□ -0.77
VPS4B-207ENST00000591519 SPATA22Q8NHS9 363 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 BRSK1Q8TDC3 778 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 GPR63Q9BZJ6 419 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 TRABDQ9H4I3 376 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 ARFGAP3Q9NP61 516 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 POT1Q9NUX5 634 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 DDX56Q9NY93 547 aaKnown RBP10.23□□□□□ -0.77
VPS4B-207ENST00000591519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS4B-207ENST00000591519 EPHA6Q9UF33 1036 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 BSNQ9UPA5 3926 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 A0A0A6YYK5 440 aaPredicted RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 AURKAO14965 403 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 MTSS1O43312 755 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 MAN1A2O60476 641 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 UBXN7O94888 489 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 RECKO95980 971 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 IDSP22304 550 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 PTPN3P26045 913 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 CD68P34810 354 aaPredicted RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 STAT5AP42229 794 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 CDKN2BP42772 138 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 PPM1FP49593 454 aaPredicted RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 GFERP55789 205 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 MC1RQ01726 317 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 WASHC5Q12768 1159 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 PRKD1Q15139 912 aaPredicted RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 PCSK7Q16549 785 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 KHDC1Q4VXA5 237 aaKnown RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 ODF2Q5BJF6 829 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 FAM182AQ5T1J6 154 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 ZDHHC20Q5W0Z9 365 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 MFSD7Q6UXD7 560 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 ESX1Q8N693 406 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 KLHL6Q8WZ60 621 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 CEP41Q9BYV8 373 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 LACRTQ9GZZ8 138 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 ZMYND15Q9H091 742 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 OSGEPL1Q9H4B0 414 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF768Q9H5H4 540 aaKnown RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 IL26Q9NPH9 171 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 IL17CQ9P0M4 197 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 SEMA5BQ9P283 1151 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 TRIM10Q9UDY6 481 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 FAM153AQ9UHL3 310 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 SPO11Q9Y5K1 396 aa10.22□□□□□ -0.77
VPS4B-207ENST00000591519 DNMT3AQ9Y6K1 912 aaPredicted RBP10.22□□□□□ -0.77
VPS4B-207ENST00000591519 UBR5O95071 2799 aaPredicted RBP10.21□□□□□ -0.77
VPS4B-207ENST00000591519 MACROD2A1Z1Q3 448 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 ARHGAP6O43182 974 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 MTX2O75431 263 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 PMPCBO75439 489 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 FGF5P12034 268 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TYRP1P17643 537 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 AMD1P17707 334 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 MAPK9P45984 424 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 VAV2P52735 878 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 HADHBP55084 474 aaKnown RBP10.21□□□□□ -0.77
VPS4B-207ENST00000591519 WNT3AP56704 352 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 GSDMDP57764 484 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 DYNLT1P63172 113 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 DMPKQ09013 629 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 CDC20Q12834 499 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TFDP2Q14188 446 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 INSCQ1MX18 579 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 ATP13A5Q4VNC0 1218 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 CRTC3Q6UUV7 619 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 KDELC1Q6UW63 502 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 PRSS42Q7Z5A4 293 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 DAAM2Q86T65 1068 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 RFX6Q8HWS3 928 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TRIM48Q8IWZ4 208 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 UNC5BQ8IZJ1 945 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TTC30BQ8N4P2 665 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TFB1MQ8WVM0 346 aaKnown RBP10.21□□□□□ -0.77
VPS4B-207ENST00000591519 APOBEC4Q8WW27 367 aaKnown RBP10.21□□□□□ -0.77
VPS4B-207ENST00000591519 ZDHHC12Q96GR4 267 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 FCRL4Q96PJ5 515 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 FCRL5Q96RD9 977 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 VAT1Q99536 393 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 TRIM4Q9C037 500 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 HACD3Q9P035 362 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 KLHL3Q9UH77 587 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 ANAPC2Q9UJX6 822 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 ALG6Q9Y672 507 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 RPS6KL1Q9Y6S9 549 aa10.21□□□□□ -0.77
VPS4B-207ENST00000591519 PDZK1P1A8MUH7 402 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 CST8O60676 142 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 BMP2P12643 396 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 VCLP18206 1134 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 TCN2P20062 427 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 F8A1P23610 371 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 RPL10P27635 214 aaKnown RBP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 OAS2P29728 719 aaKnown RBP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 CASRP41180 1078 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 LEPRP48357 1165 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms