RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF514Q96K75 400 aaPredicted RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 COPS8Q99627 209 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 WASH6PQ9NQA3 447 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 NLE1Q9NVX2 485 aaPredicted RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 TMEM9Q9P0T7 183 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 FAM8A1Q9UBU6 413 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 KLHL3Q9UH77 587 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 PSMD13Q9UNM6 376 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 MGAT4DA6NG13 374 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CDRT15L2A8MXV6 281 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 HGSO14964 777 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 POLBP06746 335 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 APRTP07741 180 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CCL4P13236 92 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 ATP1B2P14415 290 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 BRAFP15056 766 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CSF2RBP32927 897 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 ETV5P41161 510 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 GRIA1P42261 906 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CDKN1CP49918 316 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 EPHA4P54764 986 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 SIX1Q15475 284 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 AGAP9Q5VTM2 703 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 DRICH1Q6PGQ1 229 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 FAM83HQ6ZRV2 1179 aaPredicted RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 PDZD3Q86UT5 571 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CFAP206Q8IYR0 622 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 AGBL5Q8NDL9 886 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 HEXDCQ8WVB3 486 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 CRELD1Q96HD1 420 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 TRMT1Q9NXH9 659 aaKnown RBP11.86□□□□□ -0.51
TPM4-212ENST00000590180 ZDHHC3Q9NYG2 299 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 WDR37Q9Y2I8 494 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 JRKLQ9Y4A0 524 aa11.86□□□□□ -0.51
TPM4-212ENST00000590180 PTPRQQ9UMZ3 2332 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 AGAP14A8MT82 685 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 NVLO15381 856 aaKnown RBP11.85□□□□□ -0.51
TPM4-212ENST00000590180 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 UBXN7O94888 489 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 SUN1O94901 812 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 PRSS56P0CW18 603 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 THRAP10827 490 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 ADRA1DP25100 572 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 TLE3Q04726 772 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 CACNG1Q06432 222 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 DMPKQ09013 629 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 SEMA5AQ13591 1074 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 GSE1Q14687 1217 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 RPE65Q16518 533 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 METRNLQ641Q3 311 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 WDR74Q6RFH5 385 aaPredicted RBP11.85□□□□□ -0.51
TPM4-212ENST00000590180 C4orf22Q6V702 233 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 MICALCLQ6ZW33 695 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 SERPINA9Q86WD7 417 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 PLXDC1Q8IUK5 500 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 REXO1L1PQ8IX06 675 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 PBKQ96KB5 322 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 C19orf43Q9BQ61 176 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 DPH1Q9BZG8 443 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 WWP1Q9H0M0 922 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 EPB41L1Q9H4G0 881 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 UCK1Q9HA47 277 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 POT1Q9NUX5 634 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 ACSL5Q9ULC5 683 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 PCDHGA7Q9Y5G6 932 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 ADAMTS20P59510 1910 aa11.85□□□□□ -0.51
TPM4-212ENST00000590180 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 CCDC162PA2VCL2 907 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 LILRA5A6NI73 299 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 PRR19A6NJB7 356 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 EFCAB7A8K855 629 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 H7C0S8 307 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 PRAMEF10O60809 474 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 FGF3P11487 239 aaPredicted RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 ARSDP51689 593 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 TERF1P54274 439 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 CXADRP78310 365 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 KRT33BQ14525 404 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 TRIP13Q15645 432 aaPredicted RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 BCL7AQ4VC05 210 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 ZFAND4Q86XD8 727 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 FAM129CQ86XR2 697 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms