RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PDK1Q15118 436 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 PRKD1Q15139 912 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-204ENST00000588687 SLC18A3Q16572 532 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 UGT8Q16880 541 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 KDELC1Q6UW63 502 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 H2AFVQ71UI9 128 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 B4GALNT4Q76KP1 1039 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 LUZP1Q86V48 1076 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 RASGEF1AQ8N9B8 481 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CPLX3Q8WVH0 158 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CTNNBL1Q8WYA6 563 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-204ENST00000588687 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 MAP3K3Q99759 626 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 GLOD4Q9HC38 313 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CBX8Q9HC52 389 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 PDE7BQ9NP56 450 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 LCMT1Q9UIC8 334 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 RARRES3Q9UL19 164 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CELSR2Q9HCU4 2923 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 LOC285095A0A1B0GVY8 99 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 APOL1O14791 398 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 SORBS2O94875 1100 aaKnown RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 PTPN3P26045 913 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 RPE65Q16518 533 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 TEX44Q53QW1 395 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 PAPD7Q5XG87 772 aaKnown RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 CYB5D1Q6P9G0 228 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 FAM199XQ6PEV8 388 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 SIDT2Q8NBJ9 832 aaKnown RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 DDHD1Q8NEL9 900 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 ZNF514Q96K75 400 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 TEKT5Q96M29 485 aa18.02■□□□□ 0.48
CCDC43-204ENST00000588687 XPO4Q9C0E2 1151 aaKnown RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 LUC7L2Q9Y383 392 aaKnown RBP18.02■□□□□ 0.48
CCDC43-204ENST00000588687 A0A0A6YYK5 440 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-204ENST00000588687 TLCD2A6NGC4 264 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 PPP1R12AO14974 1030 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-204ENST00000588687 PMPCBO75439 489 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 TMEM253P0C7T8 217 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 RNF224P0DH78 156 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 VCLP18206 1134 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 PTPN4P29074 926 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 WASHC5Q12768 1159 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 NFE2L1Q14494 772 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 HIST2H2BCQ6DN03 193 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 CAVIN1Q6NZI2 390 aaKnown RBP18.01■□□□□ 0.47
CCDC43-204ENST00000588687 KMT5CQ86Y97 462 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 D2HGDHQ8N465 521 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 GALNT11Q8NCW6 608 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 ADAMTS17Q8TE56 1095 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 SRPK1Q96SB4 655 aaKnown RBP18.01■□□□□ 0.47
CCDC43-204ENST00000588687 GPR87Q9BY21 358 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 FGF21Q9NSA1 209 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 UBP1Q9NZI7 540 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 IL17CQ9P0M4 197 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 PSMD13Q9UNM6 376 aa18.01■□□□□ 0.47
CCDC43-204ENST00000588687 PCDHGA9Q9Y5G4 932 aaKnown RBP18.01■□□□□ 0.47
CCDC43-204ENST00000588687 OR5K3A6NET4 321 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 KCNJ13O60928 360 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 SPTBP11277 2137 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 MTHFD1P11586 935 aaKnown RBP18■□□□□ 0.47
CCDC43-204ENST00000588687 GNLYP22749 145 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 HALP42357 657 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 CHRNA4P43681 627 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 UBASH3AP57075 661 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 ACY1Q03154 408 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 CHAF1BQ13112 559 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 GPS2Q13227 327 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 MESDQ14696 234 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 CHRNA6Q15825 494 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 TAZQ16635 292 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 NADK2Q4G0N4 442 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 SIRPB2Q5JXA9 342 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 SYVN1Q86TM6 617 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 AMZ2Q86W34 360 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 BPHLQ86WA6 291 aaPredicted RBP18■□□□□ 0.47
CCDC43-204ENST00000588687 SLC38A9Q8NBW4 561 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 BRSK1Q8TDC3 778 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 TRAF3IP1Q8TDR0 691 aaPredicted RBP18■□□□□ 0.47
CCDC43-204ENST00000588687 THAP4Q8WY91 577 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 SEC14L1Q92503 715 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 CD180Q99467 661 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 TRABDQ9H4I3 376 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 SMOXQ9NWM0 555 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 LRBAP50851 2863 aa18■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A9O60656 530 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 CPNE3O75131 537 aaKnown RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 POP7O75817 140 aaKnown RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 CEACAM4O75871 244 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 KRT1P04264 644 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 PECAM1P16284 738 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A6P19224 532 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A1P22309 533 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A4P22310 534 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 SPAM1P38567 509 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 WNT3AP56704 352 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 GTF2H3Q13889 308 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 ZFYVE27Q5T4F4 411 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 GPRC6AQ5T6X5 926 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms