RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 RARRES3Q9UL19 164 aa13.44□□□□□ -0.26
HDAC5-208ENST00000588419 PLAAQ9Y263 795 aa13.44□□□□□ -0.26
HDAC5-208ENST00000588419 MAN2B2Q9Y2E5 1009 aa13.44□□□□□ -0.26
HDAC5-208ENST00000588419 KCNMB2Q9Y691 235 aa13.44□□□□□ -0.26
HDAC5-208ENST00000588419 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 PIPSLA2A3N6 862 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 K7EM74 188 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TOX3O15405 576 aaPredicted RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RFPL1O75677 317 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 POP7O75817 140 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 EBLN1P0CF75 366 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 CD68P34810 354 aaPredicted RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 ARCN1P48444 511 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 CTSCP53634 463 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RPS18P62269 152 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 FOXK1P85037 733 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 KLRB1Q12918 225 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 PTPN13Q12923 2485 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TFDP2Q14188 446 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 SLC14A2Q15849 920 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 AGAP9Q5VTM2 703 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 CYB5D1Q6P9G0 228 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TMEM220Q6QAJ8 160 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 PID1Q7Z2X4 250 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 C11orf96Q7Z7L8 435 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RBM12BQ8IXT5 1001 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 BEND7Q8N7W2 519 aaPredicted RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RASGEF1AQ8N9B8 481 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TADA1Q96BN2 335 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 TEKT5Q96M29 485 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 SRPK1Q96SB4 655 aaKnown RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RUFY1Q96T51 708 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 DNAJC7Q99615 494 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
HDAC5-208ENST00000588419 ANKMY1Q9P2S6 941 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 KCND3Q9UK17 655 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 PKP3Q9Y446 797 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 PIKFYVEQ9Y2I7 2098 aa13.43□□□□□ -0.26
HDAC5-208ENST00000588419 SPTBP11277 2137 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 UBA6A0AVT1 1052 aaPredicted RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MACROD2A1Z1Q3 448 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MTSS1O43312 755 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MFAP3LO75121 409 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 DNAJB5O75953 348 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MT-ND3P03897 115 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 NTRK1P04629 796 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 FGF5P12034 268 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 FOLR1P15328 257 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MSH3P20585 1137 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 FECHP22830 423 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 CA5AP35218 305 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 HMGCLP35914 325 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 UBAP2LQ14157 1087 aaKnown RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 PTPRCAPQ14761 206 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 RPE65Q16518 533 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 LDLRAP1Q5SW96 308 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 FNBP1LQ5T0N5 605 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 GPRC6AQ5T6X5 926 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 PWWP2BQ6NUJ5 590 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 FAM199XQ6PEV8 388 aaPredicted RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 KDELC1Q6UW63 502 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 WASH2PQ6VEQ5 465 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 SPOCD1Q6ZMY3 1216 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 ASB18Q6ZVZ8 466 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 BZW1Q7L1Q6 419 aaKnown RBP13.42□□□□□ -0.26
HDAC5-208ENST00000588419 BRSK1Q8TDC3 778 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 KLHL6Q8WZ60 621 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 P3H4Q92791 437 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MRGPRX2Q96LB1 330 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 C12orf66Q96MD2 445 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 WWP1Q9H0M0 922 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 ACTL8Q9H568 366 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 IL26Q9NPH9 171 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 LHX9Q9NQ69 397 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 WASH6PQ9NQA3 447 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 SOHLH2Q9NX45 425 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 PADI1Q9ULC6 663 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 NBASA2RRP1 2371 aa13.42□□□□□ -0.26
HDAC5-208ENST00000588419 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 CREG1O75629 220 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 CDKN2BP42772 138 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 SLC1A1P43005 524 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 MLLT10P55197 1068 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 WASHC5Q12768 1159 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 CHAF1BQ13112 559 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 ITGA9Q13797 1035 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 SLC1A5Q15758 541 aa13.41□□□□□ -0.26
HDAC5-208ENST00000588419 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms