RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 POLR1BQ9H9Y6 1135 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 MRM3Q9HC36 420 aaKnown RBP9.93□□□□□ -0.82
TPM4-207ENST00000588032 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
TPM4-207ENST00000588032 CHRAC1Q9NRG0 131 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 POT1Q9NUX5 634 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 SMARCAL1Q9NZC9 954 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 ANAPC5Q9UJX4 755 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 SCN8AQ9UQD0 1980 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
TPM4-207ENST00000588032 IGHV1OR21-1A0A087WYE8 117 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 CCDC187A0A096LP49 1063 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 LILRA5A6NI73 299 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 DXOO77932 396 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 GOT2P00505 430 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 VIPP01282 170 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 RPL10P27635 214 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 CD1CP29017 333 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 FOXN2P32314 431 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 SLC19A1P41440 591 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 VPS41P49754 854 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 ETF1P62495 437 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 UBE2IP63279 158 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 CYP4F3Q08477 520 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 TRA2AQ13595 282 aaKnown RBP eCLIP9.92□□□□□ -0.82
TPM4-207ENST00000588032 ST3GAL2Q16842 350 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 AMZ1Q400G9 498 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 MAP9Q49MG5 647 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 FASTKD1Q53R41 847 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 WDR74Q6RFH5 385 aaPredicted RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 IGF2-ASQ6U949 168 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 PACS1Q6VY07 963 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 DET1Q7L5Y6 550 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 TRIM48Q8IWZ4 208 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 PPIL6Q8IXY8 311 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 OR4D9Q8NGE8 314 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 OR6P1Q8NGX9 317 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 WDR36Q8NI36 951 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 ZFPM2Q8WW38 1151 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 CPT1BQ92523 772 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 CXorf40BQ96DE9 158 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 ATXN7L3BQ96GX2 97 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 AHCYL2Q96HN2 611 aaKnown RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 SLC40A1Q9NP59 571 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 TREX1Q9NSU2 369 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 AKAP7Q9P0M2 348 aaPredicted RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 ZNF624Q9P2J8 865 aaPredicted RBP9.92□□□□□ -0.82
TPM4-207ENST00000588032 SLC2A6Q9UGQ3 507 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 PCDHB1Q9Y5F3 818 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 PCDHGA8Q9Y5G5 932 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 PLXNB3Q9ULL4 1909 aa9.92□□□□□ -0.82
TPM4-207ENST00000588032 NCOR2Q9Y618 2525 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 TCRBV7S3A2A0A539 114 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 CCDC78A2IDD5 438 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 SDR42E2A6NKP2 422 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 SMAPO00193 183 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 HGSO14964 777 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 PFDN6O15212 129 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 SGTAO43765 313 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 DUX1O43812 170 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 FTH1P02794 183 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 BRAFP15056 766 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PAMP19021 973 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 MGAT1P26572 445 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 RBMS1P29558 406 aaKnown RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 CASQ1P31415 396 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 TTPAP49638 278 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 PDX1P52945 283 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 LIMK2P53671 638 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 ERVPABLB-1P60509 514 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 GABREP78334 506 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PLOD1Q02809 727 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 RPA4Q13156 261 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PTK6Q13882 451 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 NFE2L1Q14494 772 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 CLCA4Q14CN2 919 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 SEPT7Q16181 437 aaKnown RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 DBN1Q16643 649 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 TMEM71Q6P5X7 295 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 TMEM26Q6ZUK4 368 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 USP53Q70EK8 1073 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 ZNF534Q76KX8 674 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PROSER1Q86XN7 944 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 CFAP206Q8IYR0 622 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 MPP5Q8N3R9 675 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 HM13Q8TCT9 377 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 ZNF778Q96MU6 729 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 ZNF578Q96N58 590 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 CMKLR1Q99788 373 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 DDX47Q9H0S4 455 aaKnown RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 SCHIP1Q9P0W5 487 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 PDP2Q9P2J9 529 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 ATXN7L1Q9ULK2 861 aaPredicted RBP9.91□□□□□ -0.82
TPM4-207ENST00000588032 SOX13Q9UN79 622 aa9.91□□□□□ -0.82
TPM4-207ENST00000588032 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms